RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 COX5BP10606 129 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 CTSEP14091 401 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 AKR1C4P17516 323 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 ATF1P18846 271 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 AGTR1P30556 359 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 CD79BP40259 229 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 MAGEA2P43356 314 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 MP68P56378 58 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 RWDD2BP57060 319 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 MYL6P60660 151 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 RAB2AP61019 212 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 PAFAH1B3Q15102 231 aaKnown RBP0.53□□□□□ -2.32
CLK4-213ENST00000523013 CLEC12BQ2HXU8 276 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 HLA-DRB5Q30154 266 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 MESTQ5EB52 335 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 CENPWQ5EE01 88 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 CDKL4Q5MAI5 379 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 EBLN2Q6P2I7 272 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 DOLPP1Q86YN1 238 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 ATP6V1C2Q8NEY4 427 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 OR9I1Q8NGQ6 314 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 OR5K1Q8NHB7 308 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 PPWD1Q96BP3 646 aaKnown RBP0.53□□□□□ -2.32
CLK4-213ENST00000523013 SMIM19Q96E16 107 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 SMIM12Q96EX1 92 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 HSPB9Q9BQS6 159 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 DCUN1D5Q9BTE7 237 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 C1QTNF6Q9BXI9 259 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 GNB1LQ9BYB4 327 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 PARD6GQ9BYG4 376 aaPredicted RBP0.53□□□□□ -2.32
CLK4-213ENST00000523013 SLC22A4Q9H015 551 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 MS4A6AQ9H2W1 248 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 UBQLN4Q9NRR5 601 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 SPANXB1Q9NS25 103 aaPredicted RBP0.53□□□□□ -2.32
CLK4-213ENST00000523013 COMMD9Q9P000 198 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 CLUHO75153 1309 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 RAB3GAP2Q9H2M9 1393 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 FREM1Q5H8C1 2179 aa0.53□□□□□ -2.32
CLK4-213ENST00000523013 PEG3Q9GZU2 1588 aa0.53□□□□□ -2.33
CLK4-213ENST00000523013 DOCK3Q8IZD9 2030 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 METTL15A6NJ78 407 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 H0Y980 276 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 H3BSA7 217 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 CXCR6O00574 342 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 BIRC5O15392 142 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 ATP6V1G2O95670 118 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 HLA-DRAP01903 254 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 S100A6P06703 90 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 SERPINA6P08185 405 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 PRB4P10163 310 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 UGT2B7P16662 529 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 F8A1P23610 371 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 MIPP30301 263 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 ADORA1P30542 326 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 ACTR1BP42025 376 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 LINC00313P59037 77 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 DYNLL1P63167 89 aaKnown RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 BSPH1Q075Z2 132 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 MLLT11Q13015 90 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 SKP2Q13309 424 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 C1DQ13901 141 aaKnown RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 PDGFRLQ15198 375 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 DNAL1Q4LDG9 190 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 SPATA31B1PQ5VZV4 182 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 PTRHD1Q6GMV3 140 aaKnown RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 TTC33Q6PID6 262 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 OLIG3Q7RTU3 272 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 FAM19A5Q7Z5A7 132 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 SLC13A5Q86YT5 568 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 Q8N402 240 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 ZNF565Q8N9K5 539 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 TMEM75Q8N9X5 138 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR8J2Q8NGG1 315 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR5D18Q8NGL1 313 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR4X1Q8NH49 305 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR51H1Q8NH63 302 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR10D3Q8NH80 312 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 ZNRF2Q8NHG8 242 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 DTD1Q8TEA8 209 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 TNFAIP8L1Q8WVP5 186 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 RNF133Q8WVZ7 376 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 TAMM41Q96BW9 452 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 KCTD7Q96MP8 289 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 SPZ1Q9BXG8 430 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 CDCA4Q9BXL8 241 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 MROQ9BYG7 248 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 NSRP1Q9H0G5 558 aaKnown RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 GTSF1LQ9H1H1 148 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 OR51B6Q9H340 312 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 SMDT1Q9H4I9 107 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 BABAM2Q9NXR7 383 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 NKIRAS1Q9NYS0 192 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 TMEM216Q9P0N5 145 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 LINC00527Q9UJ94 153 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.52□□□□□ -2.33
CLK4-213ENST00000523013 V9GYY5 206 aaPredicted RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 MYO3BQ8WXR4 1341 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 KDM5BQ9UGL1 1544 aa0.52□□□□□ -2.33
CLK4-213ENST00000523013 DNMT1P26358 1616 aaKnown RBP0.52□□□□□ -2.33
CLK4-213ENST00000523013 CHD5Q8TDI0 1954 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms