RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PROP1O75360 226 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 IGLV1-40P01703 118 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 SNRPBP14678 240 aaKnown RBP16.11■□□□□ 0.17
SDCBP-209ENST00000522243 MOGAT2Q3SYC2 334 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 C9orf66Q5T8R8 295 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 ZNF367Q7RTV3 350 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 ABHD5Q8WTS1 349 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 CASTOR1Q8WTX7 329 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 UBE2E2Q96LR5 201 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 CLCC1Q96S66 551 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 A3GALT2U3KPV4 340 aa16.11■□□□□ 0.17
SDCBP-209ENST00000522243 A0A1W2PN81 502 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 MC5RP33032 325 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 CHRNA7P36544 502 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 HSPA13P48723 471 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 RAB9AP51151 201 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 PSMD7P51665 324 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 GNB1P62873 340 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 CX3CL1P78423 397 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 CD69Q07108 199 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 FHL3Q13643 280 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 ZNF660Q6AZW8 331 aaPredicted RBP16.1■□□□□ 0.17
SDCBP-209ENST00000522243 OR5AN1Q8NGI8 311 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 OR1N2Q8NGR9 330 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 GHITMQ9H3K2 345 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 ZNF221Q9UK13 617 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 RAB22AQ9UL26 194 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 BLOC1S6Q9UL45 172 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 VSIG4Q9Y279 399 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 KCNK7Q9Y2U2 307 aa16.1■□□□□ 0.17
SDCBP-209ENST00000522243 TRDCB7Z8K6 153 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 PDCD5O14737 125 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 SOX15O60248 233 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 CD3GP09693 182 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 VAX1Q5SQQ9 334 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 ASPHD1Q5U4P2 390 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 ZNF383Q8NA42 475 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 MINDY2Q8NBR6 621 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 PTX4Q96A99 478 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 PRR25Q96S07 402 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 FAM103A1Q9BTL3 118 aaKnown RBP16.09■□□□□ 0.17
SDCBP-209ENST00000522243 RDH8Q9NYR8 311 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 GAB2Q9UQC2 676 aa16.09■□□□□ 0.17
SDCBP-209ENST00000522243 A0A075B6Q4 140 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 A0A0B4J203 849 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 I3L521 148 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 ECI1P42126 302 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 MRPS15P82914 257 aaKnown RBP16.08■□□□□ 0.16
SDCBP-209ENST00000522243 ZNF260Q3ZCT1 412 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 RAB3CQ96E17 227 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 ALX4Q9H161 411 aaPredicted RBP16.08■□□□□ 0.16
SDCBP-209ENST00000522243 METTL1Q9UBP6 276 aaKnown RBP16.08■□□□□ 0.16
SDCBP-209ENST00000522243 ZMAT5Q9UDW3 170 aaKnown RBP16.08■□□□□ 0.16
SDCBP-209ENST00000522243 SCOCQ9UIL1 159 aa16.08■□□□□ 0.16
SDCBP-209ENST00000522243 TRAV1-2A0A0B4J238 106 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 FABP7O15540 132 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 RAMP3O60896 148 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 RBBP9O75884 186 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 EGR2P11161 476 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-209ENST00000522243 GNB3P16520 340 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 MYL9P24844 172 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 RANBP1P43487 201 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 RPS16P62249 146 aaKnown RBP16.07■□□□□ 0.16
SDCBP-209ENST00000522243 ZNF616Q08AN1 781 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 PSG5Q15238 335 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 C19orf54Q5BKX5 351 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 IGSF11Q5DX21 431 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 MAFIPQ8WZ33 124 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 B9D2Q9BPU9 175 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 NDUFB11Q9NX14 153 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 RAB26Q9ULW5 256 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 FOXA2Q9Y261 457 aaPredicted RBP16.07■□□□□ 0.16
SDCBP-209ENST00000522243 NUBP2Q9Y5Y2 271 aa16.07■□□□□ 0.16
SDCBP-209ENST00000522243 TRDV1A0A1B0GX56 115 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 SMIM30A4D0T7 59 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 IFITM5A6NNB3 132 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 M0R1X1 148 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 BET1O15155 118 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 IGKV1-16P04430 117 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 TFAP2AP05549 437 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 FCGR3AP08637 254 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 OR8U8P0C7N1 319 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 GSTT2P0CG29 244 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 GSTT2BP0CG30 244 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 CRIP2P52943 208 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-209ENST00000522243 RUNX1Q01196 453 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 UNQ5815/PRO19632Q6UWF5 114 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 PPP1R27Q86WC6 154 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 OR4A4PQ8NGN8 299 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 OR10R2Q8NGX6 335 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 RNF5Q99942 180 aa16.06■□□□□ 0.16
SDCBP-209ENST00000522243 ZNF230Q9UIE0 474 aaPredicted RBP16.06■□□□□ 0.16
SDCBP-209ENST00000522243 CA2P00918 260 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 RAB3BP20337 219 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 C22orf42Q6IC83 251 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 CD200R1LQ6Q8B3 271 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 DCUN1D4Q92564 292 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 TSNAXQ99598 290 aaKnown RBP16.05■□□□□ 0.16
SDCBP-209ENST00000522243 TPSG1Q9NRR2 321 aa16.05■□□□□ 0.16
SDCBP-209ENST00000522243 RAB27BO00194 218 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms