RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 GPHA2Q96T91 129 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 DLL3Q9NYJ7 618 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 IGKV1D-43A0A0B4J1Z2 117 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 OR5AL1P0C617 328 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 IER3P46695 156 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 CLDN14O95500 239 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 TRGC2P03986 189 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 KLK2P20151 261 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 UCP3P55916 312 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 PKIAP61925 76 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 KHDC1LQ5JSQ8 128 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 SELENOHQ8IZQ5 122 aaKnown RBP11.88□□□□□ -0.51
SYNPO-205ENST00000522122 FGFRL1Q8N441 504 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 SAP25Q8TEE9 199 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
SYNPO-205ENST00000522122 M0R2Z0 102 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 OR2J3O76001 311 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 NEURL1O76050 574 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 SRSF3P84103 164 aaKnown RBP11.88□□□□□ -0.51
SYNPO-205ENST00000522122 ELOBQ15370 118 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 C10orf128Q5T292 105 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 FAM214BQ7L5A3 538 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 STXBP6Q8NFX7 210 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 PKIBQ9C010 78 aa11.88□□□□□ -0.51
SYNPO-205ENST00000522122 H0YL77 283 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 KIF26BQ2KJY2 2108 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 IGHV3OR15-7A0A075B7D8 119 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 MPDU1O75352 247 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 MST1P26927 711 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 RND3P61587 244 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 FAM209BQ5JX69 171 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 Q6ZN92 141 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 BIVMQ86UB2 503 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 RAB1CQ92928 201 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 PRDM14Q9GZV8 571 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 PCOLCEQ15113 449 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 GOLT1BQ9Y3E0 138 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 SNRNP200O75643 2136 aaKnown RBP11.87□□□□□ -0.51
SYNPO-205ENST00000522122 ABCA7Q8IZY2 2146 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 FAM90A27PA6NNH2 459 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 RAB29O14966 203 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 CD3EP07766 207 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 COL8A1P27658 744 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 OR10J1P30954 320 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 SAXO1Q8IYX7 474 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
SYNPO-205ENST00000522122 WNT5BQ9H1J7 359 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 IL19Q9UHD0 177 aa11.87□□□□□ -0.51
SYNPO-205ENST00000522122 A0A1W2PPE3 182 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 P01737 135 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 CLPSP04118 112 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 CSN3P07498 182 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 RHOVQ96L33 236 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 M0R296 226 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 NPBWR2P48146 333 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 PAQR4Q8N4S7 273 aaPredicted RBP11.86□□□□□ -0.51
SYNPO-205ENST00000522122 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 HES7Q9BYE0 225 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 FAM117AQ9C073 453 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 TMEM191AQ9H0A3 160 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 SH3BGRL3Q9H299 93 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 PXMP4Q9Y6I8 212 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 FAM157AC9JC47 383 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 FAM90A26D6RGX4 464 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 COX6A1P12074 109 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 CD82P27701 267 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 KCNMB1Q16558 191 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 C1QL2Q7Z5L3 287 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 TMEM54Q969K7 222 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 P2RX4Q99571 388 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 SRXN1Q9BYN0 137 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 MS4A5Q9H3V2 200 aa11.86□□□□□ -0.51
SYNPO-205ENST00000522122 ZNF71Q9NQZ8 489 aaPredicted RBP11.86□□□□□ -0.51
SYNPO-205ENST00000522122 RAMP1O60894 148 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 NDUFB4O95168 129 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 COX5BP10606 129 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 MPV17P39210 176 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
SYNPO-205ENST00000522122 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 TMEM204Q9BSN7 226 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 INSIG2Q9Y5U4 225 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 IGSF23A1L1A6 192 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 CBY3A6NI87 242 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 FAM87AP0C7U9 286 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 LINC00271P0C7V0 271 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 FHITP49789 147 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 PLAURQ03405 335 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 RAB24Q969Q5 203 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 STARD4Q96DR4 205 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 PERPQ96FX8 193 aa11.85□□□□□ -0.51
SYNPO-205ENST00000522122 OR51B2Q9Y5P1 312 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms