RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ABHD17AQ96GS6 310 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 LPAR5Q9H1C0 372 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 AKIRIN1Q9H9L7 192 aaPredicted RBP13.97□□□□□ -0.17
USP42-207ENST00000521713 RALYQ9UKM9 306 aaKnown RBP13.97□□□□□ -0.17
USP42-207ENST00000521713 RHBDL1O75783 438 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 HIST1H1EP10412 219 aaKnown RBP13.97□□□□□ -0.17
USP42-207ENST00000521713 OR4A47Q6IF82 309 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 PRDM14Q9GZV8 571 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 CARHSP1Q9Y2V2 147 aaKnown RBP13.97□□□□□ -0.17
USP42-207ENST00000521713 PAGE4O60829 102 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 COL10A1Q03692 680 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 AESQ08117 197 aa13.97□□□□□ -0.17
USP42-207ENST00000521713 DTD1Q8TEA8 209 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 HIST1H2BAQ96A08 127 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 TMEM45BQ96B21 275 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 PKIBQ9C010 78 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 TUBD1Q9UJT1 453 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 ISG15P05161 165 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 IER3P46695 156 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 STXBP6Q8NFX7 210 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 PARD6GQ9BYG4 376 aaPredicted RBP13.96□□□□□ -0.17
USP42-207ENST00000521713 DCAF16Q9NXF7 216 aa13.96□□□□□ -0.17
USP42-207ENST00000521713 C10orf128Q5T292 105 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 GAPTQ8N292 157 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 OR11H4Q8NGC9 324 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 HARBI1Q96MB7 349 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 ZNF714Q96N38 554 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 PCGF1Q9BSM1 259 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 GGACTQ9BVM4 153 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 LHFPL6Q9Y693 200 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 LOC102723996A0A087X1L8 192 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A10PA6NDY2 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A18PA6NE21 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A16PA6NEW6 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A20PA6NIJ5 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A8PA6NJQ4 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A7PA6NKC0 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A22PA8MWA6 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A12PA8MX19 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A5PA8MXJ8 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A23PA8MXZ1 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 IGHMP01871 453 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A15PP0C7V4 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A13PP0C7W8 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A14PP0C7W9 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 FAM90A24PP0C7X0 464 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 CD59P13987 128 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 LPAR2Q9HBW0 351 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 CCL28Q9NRJ3 127 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 DOK5Q9P104 306 aa13.96□□□□□ -0.18
USP42-207ENST00000521713 HELTA6NFD8 242 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 TAS2R60P59551 318 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 HERVK_113P61574 105 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 PDPNQ86YL7 162 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 OR2D3Q8NGH3 330 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 SRD5A3Q9H8P0 318 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 NPDC1Q9NQX5 325 aaPredicted RBP13.95□□□□□ -0.18
USP42-207ENST00000521713 OTOFQ9HC10 1997 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 GAGE10A6NGK3 116 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 A8MXK9 166 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 TMEM229AB2RXF0 380 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 C9orf172C9J069 976 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 SYNGR3O43761 229 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 LYZL2Q7Z4W2 148 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 CCL13Q99616 98 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 ZFP30Q9Y2G7 519 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 NTN3O00634 580 aaPredicted RBP13.95□□□□□ -0.18
USP42-207ENST00000521713 S100A4P26447 101 aaKnown RBP13.95□□□□□ -0.18
USP42-207ENST00000521713 ZNF658BQ4V348 819 aaPredicted RBP13.95□□□□□ -0.18
USP42-207ENST00000521713 TIMM23BQ5SRD1 257 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 FNDC7Q5VTL7 733 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 GCSAMQ8N6F7 178 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 KLK13Q9UKR3 277 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 SYNGR1O43759 233 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 PRSS1P07477 247 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 SGMS2Q8NHU3 365 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 WFDC6Q9BQY6 131 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 COA4Q9NYJ1 87 aa13.95□□□□□ -0.18
USP42-207ENST00000521713 ACACAQ13085 2346 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 NKX2-6A6NCS4 301 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 P01737 135 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 RFPL3SP0C7P2 107 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 RCC1P18754 421 aaPredicted RBP13.94□□□□□ -0.18
USP42-207ENST00000521713 TMUB1Q9BVT8 246 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 HSPB9Q9BQS6 159 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 HSF4Q9ULV5 492 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 MRPS18CQ9Y3D5 142 aaKnown RBP13.94□□□□□ -0.18
USP42-207ENST00000521713 TRBV5-5A0A0J9YX44 114 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 HBZP02008 142 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 ORM1P02763 201 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 PRR13Q9NZ81 148 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 LCTP09848 1927 aa13.94□□□□□ -0.18
USP42-207ENST00000521713 ZNF729A6NN14 1252 aaPredicted RBP13.93□□□□□ -0.18
USP42-207ENST00000521713 K7N7A8 449 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 SRSF10O75494 262 aaKnown RBP13.93□□□□□ -0.18
USP42-207ENST00000521713 CLDN14O95500 239 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 MPV17P39210 176 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 FDX2Q6P4F2 183 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 ZNF488Q96MN9 340 aa13.93□□□□□ -0.18
USP42-207ENST00000521713 RAB29O14966 203 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms