RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 GLI4P10075 376 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 DAOP14920 347 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 GPM6AP51674 278 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF154Q13106 437 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 PMS2P11Q13670 270 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 MSMO1Q15800 293 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 ATP6V1FQ16864 119 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM41BQ5BJD5 291 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CXorf66Q5JRM2 361 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF880Q6PDB4 577 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 SPNS3Q6ZMD2 512 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM58AQ8N1B3 248 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM217Q8N7C4 229 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 ZBTB34Q8NCN2 500 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 OR10V1Q8NGI7 309 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 MRPL30Q8TCC3 161 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 MBD3L1Q8WWY6 194 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 MAGT1Q9H0U3 335 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CALHM2Q9HA72 323 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 CCL28Q9NRJ3 127 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 GNG13Q9P2W3 67 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 VAX2Q9UIW0 290 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 EML6Q6ZMW3 1958 aa7.31□□□□□ -1.24
CTNNA1-223ENST00000520520 C5orf49A4QMS7 147 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 SYNGR2O43760 224 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 SS18L1O75177 396 aaPredicted RBP7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 PTBP3O95758 552 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 SCTP09683 121 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 PATE4P0C8F1 98 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 CD99P14209 185 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 EPHA1P21709 976 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 CCNOP22674 350 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 RND2P52198 227 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 GFRA1P56159 465 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 PLGLB1Q02325 96 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 CATR1Q13166 79 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 ELOBQ15370 118 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 NUFIP2Q7Z417 695 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 THNSL2Q86YJ6 484 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 TCTEX1D1Q8N7M0 179 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 PLPPR1Q8TBJ4 325 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM57AQ8TBR7 257 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 ABHD3Q8WU67 409 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM171Q8WVE6 324 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 OR5P3Q8WZ94 311 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 RND1Q92730 232 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 CYYR1Q96J86 154 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 RARRES2Q99969 163 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 AGMATQ9BSE5 352 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 BCL2L14Q9BZR8 327 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 MANBALQ9NQG1 85 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 PSENENQ9NZ42 101 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF581Q9P0T4 197 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 TAAR3PQ9P1P4 343 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 KCNS2Q9ULS6 477 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 LAMP3Q9UQV4 416 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 RNF115Q9Y4L5 304 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 RBM7Q9Y580 266 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 GTF3C1Q12789 2109 aa7.3□□□□□ -1.24
CTNNA1-223ENST00000520520 A0A0G2JMM0 328 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 A0A1W2PPB8 328 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 A0A1W2PPE3 182 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 A0A1W2PRS3 328 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 MAP1LC3B2A6NCE7 125 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 KIR3DP1A8MWS1 328 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 TSTD3H0UI37 97 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 H0YL77 283 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 KLRC4-KLRK1H3BQV0 150 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 CYB5BO43169 146 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 PPIHO43447 177 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF205O95201 554 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 IFNA10P01566 189 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 RAC2P15153 192 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 SELEP16581 610 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 CHRNB4P30926 498 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 ASCL1P50553 236 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 NDUFA6P56556 154 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 RAB11AP62491 216 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 RUNX1Q01196 453 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 TMEM267Q0VDI3 215 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 HERPUD1Q15011 391 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 GABRA6Q16445 453 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 FAM209BQ5JX69 171 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 LCE2CQ5TA81 110 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 CPEB3Q8NE35 698 aaKnown RBP7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 Q8WTZ3 238 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 OR5B12Q96R08 314 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 GGACTQ9BVM4 153 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 MAP1LC3BQ9GZQ8 125 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 ZNF703Q9H7S9 590 aaPredicted RBP7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 GP6Q9HCN6 339 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 KCNIP1Q9NZI2 227 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 CACNG5Q9UF02 275 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
CTNNA1-223ENST00000520520 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms