RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 NPBQ8NG41 125 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 UBE2E2Q96LR5 201 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 FAM103A1Q9BTL3 118 aaKnown RBP12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 C11orf54Q9H0W9 315 aaPredicted RBP12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 DUSP21Q9H596 190 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 Q9N2K0 584 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 ACOT13Q9NPJ3 140 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 ZNF355PQ9NSJ1 428 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 NOTCH3Q9UM47 2321 aa12.59□□□□□ -0.39
IGHV3-42-201ENST00000520410 H0YJW9 148 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 M0R1X1 148 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 NDUFA3O95167 84 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 GADD45AP24522 165 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 CD40LGP29965 261 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 RAB9AP51151 201 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 PSMD7P51665 324 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 GNB1P62873 340 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 TMEM267Q0VDI3 215 aaPredicted RBP12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 UNQ5815/PRO19632Q6UWF5 114 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF367Q7RTV3 350 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF491Q8N8L2 437 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 B9D2Q9BPU9 175 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 RDH8Q9NYR8 311 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
IGHV3-42-201ENST00000520410 TMEM272A0A1B0GTI8 110 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 TRDCB7Z8K6 153 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 SAP30O75446 220 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 RBBP9O75884 186 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 TFAP2AP05549 437 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 PPIFP30405 207 aaKnown RBP12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 CX3CL1P78423 397 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 NDPQ00604 133 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 CBX3Q13185 183 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF660Q6AZW8 331 aaPredicted RBP12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 PPP1R27Q86WC6 154 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 GRPEL2Q8TAA5 225 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 MAFIPQ8WZ33 124 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 RAB3CQ96E17 227 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 MS4A10Q96PG2 267 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 TSNAXQ99598 290 aaKnown RBP12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 ALX4Q9H161 411 aaPredicted RBP12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 GHITMQ9H3K2 345 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF580Q9UK33 172 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 FBXO7Q9Y3I1 522 aa12.57□□□□□ -0.4
IGHV3-42-201ENST00000520410 TRBV6-6A0A0A6YYG2 114 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 SMIM30A4D0T7 59 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 CA2P00918 260 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGHV3-11P01762 117 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 TALDO1P37837 337 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 TMEM50BP56557 158 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR10A3P58181 314 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 TPPP2P59282 170 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 ARFRP1Q13795 201 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 FAM89BQ8N5H3 189 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 GINS4Q9BRT9 223 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR2D2Q9H210 308 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 RAB22AQ9UL26 194 aa12.56□□□□□ -0.4
IGHV3-42-201ENST00000520410 FCN1O00602 326 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 OVOL1O14753 267 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 FABP7O15540 132 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 SLC25A17O43808 307 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 CNIH1O95406 144 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 GNB3P16520 340 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 SLURP1P55000 103 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 PLA2G7Q13093 441 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 PSG5Q15238 335 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 TBCEQ15813 527 aaPredicted RBP12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 PLAC9Q5JTB6 97 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 TCTEX1D1Q8N7M0 179 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 LFNGQ8NES3 379 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR10J5Q8NHC4 309 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 GAB2Q9UQC2 676 aa12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 ZNF256Q9Y2P7 627 aaPredicted RBP12.55□□□□□ -0.4
IGHV3-42-201ENST00000520410 LINC01619G3V211 115 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 I3L521 148 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR8U9P0C7N5 309 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 RAB3BP20337 219 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 SERPINB10P48595 397 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 LINC00205P59089 165 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 FHL3Q13643 280 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 MOGAT2Q3SYC2 334 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 PDPNQ86YL7 162 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR4A4PQ8NGN8 299 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 OR10R2Q8NGX6 335 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 ARPC1AQ92747 370 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 FLYWCH2Q96CP2 140 aaKnown RBP12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 ASCL2Q99929 193 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 ATG5Q9H1Y0 275 aa12.54□□□□□ -0.4
IGHV3-42-201ENST00000520410 IGHV4OR15-8A0A075B7B6 117 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 A0A087WW49 117 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 A0A0B4J203 849 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 METTL21EPA6NDL7 271 aa12.53□□□□□ -0.4
IGHV3-42-201ENST00000520410 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms