RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 XGP55808 180 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 HILS1P60008 231 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 SCN1BQ07699 218 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF146Q15072 292 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 RSU1Q15404 277 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 SPIN3Q5JUX0 258 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 RBM48Q5RL73 367 aaKnown RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 DDI2Q5TDH0 399 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 ASPHD2Q6ICH7 369 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 BRD3OSQ6XYD6 125 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 GDPD3Q7L5L3 318 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 PRSS48Q7RTY5 328 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 VMO1Q7Z5L0 202 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 PDZD9Q8IXQ8 264 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 MS4A15Q8N5U1 240 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 SIGLECL1Q8N7X8 197 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 PXT1Q8NFP0 134 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 OR5D13Q8NGL4 314 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 THRSPQ92748 146 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 LHX4Q969G2 390 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 DERL3Q96Q80 235 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF184Q99676 751 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 TMED9Q9BVK6 235 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 FAM192AQ9GZU8 254 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 METTL8Q9H825 291 aaKnown RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 BLOC1S6Q9UL45 172 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 GSTK1Q9Y2Q3 226 aa5.48□□□□□ -1.53
SDCBP-208ENST00000520228 LSM2Q9Y333 95 aaKnown RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 SOX21Q9Y651 276 aaPredicted RBP5.48□□□□□ -1.53
SDCBP-208ENST00000520228 TRAV8-7A0A075B6U6 113 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 A0A1W2PRV1 198 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 hADV38S2A0JD32 116 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 SIRPB1O00241 398 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 GABRPO00591 440 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 DEGS1O15121 323 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 DENRO43583 198 aaKnown RBP5.47□□□□□ -1.53
SDCBP-208ENST00000520228 OR2H2O95918 312 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 MAS1P04201 325 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF44P15621 663 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 PRTN3P24158 256 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 MAP2K4P45985 399 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 OR3A4PP47883 348 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 EDDM3BP56851 147 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 PRB3Q04118 309 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-208ENST00000520228 MEF2CQ06413 473 aaPredicted RBP5.47□□□□□ -1.53
SDCBP-208ENST00000520228 BAMBIQ13145 260 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 GPR50Q13585 617 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 EDDM3AQ14507 147 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 GRK1Q15835 563 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 DEFB112Q30KQ8 113 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ACSM3Q53FZ2 586 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 NCR3LG1Q68D85 454 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ELP2Q6IA86 826 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ASCL4Q6XD76 172 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ZNF497Q6ZNH5 498 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 C17orf107Q6ZR85 190 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 CEACAM19Q7Z692 300 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 Q8N7P7 452 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 CHST4Q8NCG5 386 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 OR10K1Q8NGX5 313 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 UFD1Q92890 307 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 S100A13Q99584 98 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 C19orf24Q9BVV8 132 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 CHST6Q9GZX3 395 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 METTL9Q9H1A3 318 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 EXOSC4Q9NPD3 245 aaKnown RBP5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ISYNA1Q9NPH2 558 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 SIRT7Q9NRC8 400 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 ING4Q9UNL4 249 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 FOXJ3Q9UPW0 622 aa5.47□□□□□ -1.53
SDCBP-208ENST00000520228 TANC2Q9HCD6 1990 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 MDFIC2A0A1B0GVS7 189 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 RNASEK-C17orf49H0YIS7 233 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 PIN1P1O15428 100 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 CDRT1O95170 752 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 CCL3L1P16619 93 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 OR3A1P47881 315 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 UBE2E1P51965 193 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 DLX1P56177 255 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 TPBGQ13641 420 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 INSL4Q14641 139 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 LIPKQ5VXJ0 399 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 Q6P435 159 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 METAP1DQ6UB28 335 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-208ENST00000520228 UNQ9370/PRO34162Q6UXP9 181 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 CDH26Q8IXH8 852 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 PHC2Q8IXK0 858 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 JAGN1Q8N5M9 183 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 ZDHHC22Q8N966 263 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 OR4S1Q8NGB4 309 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 TNFRSF14Q92956 283 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM203Q969S6 136 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 LINC00479Q96M42 142 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 MGLLQ99685 303 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 YTHDF1Q9BYJ9 559 aaKnown RBP5.46□□□□□ -1.54
SDCBP-208ENST00000520228 HEXA-AS1Q9H8Q6 139 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 ESM1Q9NQ30 184 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 IL36GQ9NZH8 169 aa5.46□□□□□ -1.54
SDCBP-208ENST00000520228 FBN3Q75N90 2809 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms