RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 HPRT1P00492 218 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 CD1BP29016 333 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ATP5IP56385 69 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 NFAM1Q8NET5 270 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF524Q96C55 264 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 R3HDM4Q96D70 268 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ELOVL1Q9BW60 279 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 DECR2Q9NUI1 292 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 UQCR10Q9UDW1 63 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 TCFL5Q9UL49 500 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SDK1Q7Z5N4 2213 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 OOEPA6NGQ2 149 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 A8MWP6 167 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 FAM157AC9JC47 383 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ACTL6BO94805 426 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 CD99P14209 185 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 RTL8BQ17RB0 113 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 IZUMO4Q1ZYL8 232 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SMIM21Q3B7S5 101 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ACSF3Q4G176 576 aaPredicted RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SPINK9Q5DT21 86 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 NMSQ5H8A3 153 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SPATA46Q5T0L3 261 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 SMIM15Q7Z3B0 74 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 FADS6Q8N9I5 356 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 OR5B3Q8NH48 314 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 ABHD5Q8WTS1 349 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 HSD17B10Q99714 261 aaKnown RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 AGMATQ9BSE5 352 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 MRPL37Q9BZE1 423 aaKnown RBP5.7□□□□□ -1.5
CPNE3-203ENST00000517490 PPP1R14DQ9NXH3 145 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 WIPI2Q9Y4P8 454 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 DENND4CQ5VZ89 1909 aa5.7□□□□□ -1.5
CPNE3-203ENST00000517490 EFNA2O43921 213 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 GZMBP10144 247 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 PCP4P48539 62 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 UBE2G1P62253 170 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 HGFACQ04756 655 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RTP5Q14D33 572 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 FAM90A2PQ658T7 463 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 C16orf54Q6UWD8 224 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 SFRP2Q96HF1 295 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 SLC35E1Q96K37 410 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 WFIKKN1Q96NZ8 548 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 TRIB1Q96RU8 372 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 PKIBQ9C010 78 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 DLL3Q9NYJ7 618 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 CLCF1Q9UBD9 225 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 PSG11Q9UQ72 335 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 TRBV9A0A0B4J1U6 114 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 FCGR3BO75015 233 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 IGLV3-19P01714 112 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 KIR2DS2P43631 304 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 ODF1Q14990 250 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RNPS1Q15287 305 aaKnown RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 CALHM1Q8IU99 346 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF664Q8N3J9 261 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 PRDM13Q9H4Q3 707 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RFNGQ9Y644 331 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 TRAV9-1A0A075B6T8 112 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 TRAV39A0A0B4J263 110 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 IGKV1D-13A0A0B4J2D9 117 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 IGHV3-64DA0A0J9YX35 117 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 M0R1X1 148 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RAB29O14966 203 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 SPINK4O60575 86 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 CD3EP07766 207 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 OR5G3P0C626 314 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 IGKV1-13P0DP09 117 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 IRF2P14316 349 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 BMI1P35226 326 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RSPO4Q2I0M5 234 aaPredicted RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF645Q8N7E2 425 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 ZNF488Q96MN9 340 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 FAM173AQ9BQD7 235 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 SPAG17Q6Q759 2223 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 KLRC4-KLRK1H3BQV0 150 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 SYNGR1O43759 233 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 CIDEAO60543 219 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 HIST3H3Q16695 136 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 GBGT1Q8N5D6 347 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 RBMXL3Q8N7X1 1067 aaKnown RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 OR51G1Q8NGK1 321 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 QTRT1Q9BXR0 403 aaKnown RBP5.69□□□□□ -1.5
CPNE3-203ENST00000517490 ARL2-SNX15V9GYD0 113 aa5.69□□□□□ -1.5
CPNE3-203ENST00000517490 HEATR5AQ86XA9 2040 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 KIF26AQ9ULI4 1882 aaPredicted RBP5.68□□□□□ -1.5
CPNE3-203ENST00000517490 A0A1W2PR77 199 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 HELTA6NFD8 242 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CER1O95813 267 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 HAND1O96004 215 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 COX5BP10606 129 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 CRYGSP22914 178 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 ZXDAP98168 799 aa5.68□□□□□ -1.5
CPNE3-203ENST00000517490 RELBQ01201 579 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms