RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 NDUFB7P17568 137 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OMGP23515 440 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RPL12P30050 165 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DUTP33316 252 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 NUP62P37198 522 aaPredicted RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LPAR6P43657 344 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 NKX2-1P43699 371 aaPredicted RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 P2RY1P47900 373 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RAB7AP51149 207 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 DLX6P56179 175 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 S100A10P60903 97 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RPL31P62899 125 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 UBA52P62987 128 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF273Q14593 569 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SMCO1Q147U7 214 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 Q3ZCU0 254 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LRRC10Q5BKY1 277 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CT45A1Q5HYN5 189 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CXorf66Q5JRM2 361 aaPredicted RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CLLU1Q5K131 121 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 GPR157Q5UAW9 335 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 HEPN1Q6WQI6 88 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF841Q6ZN19 808 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 C1orf229Q6ZS94 237 aaPredicted RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FAM219AQ8IW50 185 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ODF3L1Q8IXM7 274 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 OR8H3Q8N146 312 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CT45A3Q8NHU0 189 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF596Q8TC21 504 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CD300LFQ8TDQ1 290 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 SCARB1Q8WTV0 552 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ST8SIA2Q92186 375 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 PHYHIPLQ96FC7 376 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ARPC5LQ9BPX5 153 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RAB1BQ9H0U4 201 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 IFI27L2Q9H2X8 130 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 C19orf12Q9NSK7 152 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 COA4Q9NYJ1 87 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 GNG12Q9UBI6 72 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 CTSZQ9UBR2 303 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 LPAR3Q9UBY5 353 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RPUSD1Q9UJJ7 312 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 RCL1Q9Y2P8 373 aaKnown RBP4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 AUP1Q9Y679 476 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 FAM208BQ5VWN6 2430 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 ZNF462Q96JM2 2506 aa4.47□□□□□ -1.69
SCARNA20.4-201ENST00000516969 COL12A1Q99715 3063 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LINC00473A8K010 186 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 F5H0A9 414 aaPredicted RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LYNX1G3V0Z9 82 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 DVL1O14640 695 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 RAB29O14966 203 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SLC31A2O15432 143 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 RBFOX2O43251 390 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 GPR137BO60478 399 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 GAPDHP04406 335 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LYNX1P0DP58 116 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ZNF16P17020 682 aaPredicted RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 GPR12P47775 334 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 PAX9P55771 341 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LINC00205P59089 165 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CATR1Q13166 79 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LTC4SQ16873 150 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TMEM155Q4W5P6 130 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 NCR3LG1Q68D85 454 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 THOC7Q6I9Y2 204 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ALKAL2Q6UX46 152 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 BTNL3Q6UXE8 466 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SLC25A48Q6ZT89 311 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 FOXRED2Q8IWF2 684 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ZNF295-AS1Q8N0V1 137 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 C11orf42Q8N5U0 333 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LINC00311Q8N616 119 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 C8orf31Q8N9H6 132 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 NEU4Q8WWR8 484 aaPredicted RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 DDB2Q92466 427 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ZNF251Q9BRH9 671 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ABHD14AQ9BUJ0 271 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ARV1Q9H2C2 271 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SLC25A32Q9H2D1 315 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LSM5Q9Y4Y9 91 aaKnown RBP4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 MMP24Q9Y5R2 645 aa4.46□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TACC2O95359 2948 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 A0A087X0M5 115 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 A0A1B0GX30 115 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 A6NNC1 897 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 FAM90A9PA6NNJ1 464 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 LEUTXA8MZ59 168 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 B8ZZF3 427 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 FAM90A26D6RGX4 464 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 GPR37O15354 613 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 CHST1O43916 411 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 ATG12O94817 140 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 S1PR2O95136 353 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 SPDEFO95238 335 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 GOSR1O95249 250 aa4.45□□□□□ -1.7
SCARNA20.4-201ENST00000516969 TMEM50AO95807 157 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms