RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CMC1Q7Z7K0 106 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 IQCKQ8N0W5 287 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 LSMEM1Q8N8F7 131 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 INO80EQ8NBZ0 244 aaPredicted RBP-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 JAKMIP1Q96N16 626 aaKnown RBP-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 SLC50A1Q9BRV3 221 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 SLC25A31Q9H0C2 315 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 ORC6Q9Y5N6 252 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 DNAH7Q8WXX0 4024 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 SOGA1O94964 1423 aa-2.79□□□□□ -2.86
RNU6-542P-201ENST00000516405 DPRXA6NFQ7 191 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR2AT4A6NND4 320 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 ARPC3O15145 178 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 EIF3HO15372 352 aaKnown RBP eCLIP-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 GOSR1O95249 250 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 IQCF3P0C7M6 154 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 TAC1P20366 129 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 RFC3P40938 356 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 CCT3P49368 545 aaKnown RBP-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 GBX2P52951 348 aaPredicted RBP-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 AP1S2P56377 157 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 TRAM2Q15035 370 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 PRAMEF5Q5TYX0 476 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 PRAMEF6Q5VXH4 476 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 POMKQ9H5K3 350 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 NT5MQ9NPB1 228 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 SCML1Q9UN30 329 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 TTC21AQ8NDW8 1320 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 BCL9LQ86UU0 1499 aa-2.8□□□□□ -2.86
RNU6-542P-201ENST00000516405 CHD7Q9P2D1 2997 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TNS1Q9HBL0 1735 aaKnown RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 BICRAQ9NZM4 1560 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 IQSEC2Q5JU85 1478 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 A0A0J9YW62 118 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TRBV10-2A0A0K0K1G8 114 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 SLC9B1P1A6NJY1 282 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TMEM250H0YL14 139 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 RAB29O14966 203 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 POLR3GO15318 223 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 DKC1O60832 514 aaKnown RBP eCLIP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TBCAO75347 108 aaKnown RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 ZMPSTE24O75844 475 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 SCGNO76038 276 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 LSM8O95777 96 aaKnown RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 CATP04040 527 aaKnown RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 MT1AP04731 61 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 RAB5AP20339 215 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 NAA10P41227 235 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 FXYD4P59646 89 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 MIAQ16674 131 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 SPATA45Q537H7 98 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 C9orf64Q5T6V5 341 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TTC23LQ6PF05 361 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 CERS6Q6ZMG9 384 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 ZNF826PQ6ZT77 177 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 VTCN1Q7Z7D3 282 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 NKAIN3Q8N8D7 197 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 RLN3Q8WXF3 142 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 C22orf15Q8WYQ4 148 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 TMEM106AQ96A25 262 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 METTL26Q96S19 204 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 PARD6GQ9BYG4 376 aaPredicted RBP-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 RMND5AQ9H871 391 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 COQ4Q9Y3A0 265 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 ATG2AQ2TAZ0 1938 aa-2.81□□□□□ -2.86
RNU6-542P-201ENST00000516405 APOBP04114 4563 aaKnown RBP-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 TRAV8-4A0A0B4J246 113 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 A0A0B4J2E0 115 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CREBL2O60519 120 aaPredicted RBP-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR2F2O95006 317 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR5F1O95221 314 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 MT-ATP6P00846 226 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CA2P00918 260 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 P01737 135 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CLPSP04118 112 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 KRT20P35900 424 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 KCNJ3P48549 501 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 FGF12P61328 243 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 NDUFA5Q16718 116 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 TMEM31Q5JXX7 168 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 TTC23Q5W5X9 447 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 EBLN2Q6P2I7 272 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CFAP161Q6P656 301 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 SPAG11AQ6PDA7 123 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 WDR82Q6UXN9 313 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 FAM19A3Q7Z5A8 133 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 APRG1Q8IVJ8 170 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 ELMOD2Q8IZ81 293 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR8H3Q8N146 312 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR5K2Q8NHB8 316 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CCL17Q92583 94 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 RAB1CQ92928 201 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 TMED9Q9BVK6 235 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 OR51B5Q9H339 312 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 CHRNA9Q9UGM1 479 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 TBC1D24Q9ULP9 559 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 FIS1Q9Y3D6 152 aa-2.82□□□□□ -2.86
RNU6-542P-201ENST00000516405 DOCK11Q5JSL3 2073 aa-2.83□□□□□ -2.86
RNU6-542P-201ENST00000516405 PLXNA1Q9UIW2 1896 aa-2.83□□□□□ -2.86
RNU6-542P-201ENST00000516405 GOLGA8JA6NMD2 632 aa-2.83□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms