RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 KLF3P57682 345 aaPredicted RBP8.74□□□□□ -1.01
SMG7-215ENST00000515829 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 RCC1LQ96I51 464 aaKnown RBP8.74□□□□□ -1.01
SMG7-215ENST00000515829 ZDHHC8Q9ULC8 765 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 PMCHP20382 165 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 PRR27Q6MZM9 219 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 DPPA3Q6W0C5 159 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 SLC25A40Q8TBP6 338 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 NABP1Q96AH0 204 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 LRFN3Q9BTN0 628 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 TUBA4BQ9H853 241 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 RHBDL1O75783 438 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 CELA3AP09093 270 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 FGF5P12034 268 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 HOXA5P20719 270 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 DDTP30046 118 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 RPL11P62913 178 aaKnown RBP8.74□□□□□ -1.01
SMG7-215ENST00000515829 SPEM2Q0P670 501 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 ICAM4Q14773 271 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 RTP5Q14D33 572 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 HES3Q5TGS1 186 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 OR1L1Q8NH94 360 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 R3HDM4Q96D70 268 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 FCN1O00602 326 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 CXCL1P09341 107 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 SLC23A3Q6PIS1 610 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 ZIC4Q8N9L1 334 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 HES4Q9HCC6 221 aa8.74□□□□□ -1.01
SMG7-215ENST00000515829 CTSSP25774 331 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 LRRC29Q8WV35 223 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 LRRC3CA6NJW4 275 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 B4E171 279 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 BMI1P35226 326 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 TSPAN7P41732 249 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 CISD1Q9NZ45 108 aaKnown RBP8.73□□□□□ -1.01
SMG7-215ENST00000515829 M0QZ24 198 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 NDUFB4O95168 129 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 AGAP20933 346 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 UCP1P25874 307 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 GNG10P50151 68 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 TCL1AP56279 114 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 RIPPLY2Q5TAB7 128 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 C17orf82Q86X59 251 aaPredicted RBP8.73□□□□□ -1.01
SMG7-215ENST00000515829 TTTY12Q9BZ98 90 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 MANBALQ9NQG1 85 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 AMMECR1Q9Y4X0 333 aaPredicted RBP8.73□□□□□ -1.01
SMG7-215ENST00000515829 TRAV38-1A0A0B4J264 116 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 ZNF83P51522 516 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 GNB2P62879 340 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 ELOBQ15370 118 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 LINC00596Q86U02 117 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 C1orf174Q8IYL3 243 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 OR4D5Q8NGN0 318 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 PRDM14Q9GZV8 571 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 NAT8BQ9UHF3 227 aa8.73□□□□□ -1.01
SMG7-215ENST00000515829 ZG16O60844 167 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 TPPP2P59282 170 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HEPN1Q6WQI6 88 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 DEFB124Q8NES8 71 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 LIME1Q9H400 295 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 TREM2Q9NZC2 230 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 TIMM9Q9Y5J7 89 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 TCAPO15273 167 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BKO60814 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BJP06899 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 UMODP07911 640 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 LYL1P12980 280 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BOP23527 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BBP33778 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BDP58876 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BCP62807 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FOXC1Q12948 553 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST2H2BEQ16778 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.72□□□□□ -1.01
SMG7-215ENST00000515829 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 OR1P1Q8NH06 330 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 SGMS2Q8NHU3 365 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BHQ93079 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 RAB24Q969Q5 203 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 ANAPC16Q96DE5 110 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BNQ99877 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 HIST1H2BMQ99879 126 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 VSIRQ9H7M9 311 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 OBSL1O75147 1896 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 DOCK7Q96N67 2140 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FOLR2P14207 255 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 ANOS1P23352 680 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 TNFAIP6P98066 277 aaPredicted RBP8.72□□□□□ -1.01
SMG7-215ENST00000515829 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
SMG7-215ENST00000515829 LYG1Q8N1E2 194 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 OR2T6Q8NHC8 308 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 ACY3Q96HD9 319 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FAM90A10PA6NDY2 464 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FAM90A18PA6NE21 464 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FAM90A16PA6NEW6 464 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FAM90A20PA6NIJ5 464 aa8.72□□□□□ -1.01
SMG7-215ENST00000515829 FAM90A8PA6NJQ4 464 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms