RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 BCL6BQ8N143 479 aaPredicted RBP16.96■□□□□ 0.31
LSM6-207ENST00000515311 OR8H3Q8N146 312 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 DRAM1Q8N682 238 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 MRGPRFQ96AM1 343 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 PALMDQ9NP74 551 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 SDHAF2Q9NX18 166 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 HILPDAQ9Y5L2 63 aa16.96■□□□□ 0.31
LSM6-207ENST00000515311 LYRM1O43325 122 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 ARHGDIBP52566 201 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 DIAPH2-AS1Q14236 149 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
LSM6-207ENST00000515311 RPL39P5Q59GN2 51 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 C16orf87Q6PH81 154 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 TGIF2LXQ8IUE1 241 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 SLC38A6Q8IZM9 456 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 DYNAPQ8N1N2 210 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 ZBTB34Q8NCN2 500 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 OR13C8Q8NGS7 320 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 AKR1E2Q96JD6 320 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 MEGF9Q9H1U4 602 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 PRDM13Q9H4Q3 707 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 TBC1D24Q9ULP9 559 aa16.95■□□□□ 0.3
LSM6-207ENST00000515311 SOX21Q9Y651 276 aaPredicted RBP16.95■□□□□ 0.3
LSM6-207ENST00000515311 PROP1O75360 226 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 GNRHRP30968 328 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 BVESQ8NE79 360 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 C22orf15Q8WYQ4 148 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 C5orf30Q96GV9 206 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 RSRP1Q9BUV0 290 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 CCL28Q9NRJ3 127 aa16.94■□□□□ 0.3
LSM6-207ENST00000515311 FN1P02751 2386 aaKnown RBP16.94■□□□□ 0.3
LSM6-207ENST00000515311 ANK3Q12955 4377 aaKnown RBP16.93■□□□□ 0.3
LSM6-207ENST00000515311 TEP1Q99973 2627 aaKnown RBP16.93■□□□□ 0.3
LSM6-207ENST00000515311 IGHV1-3A0A0C4DH29 117 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 A0A1W2PPI3 338 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 CRLF1O75462 422 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 BTCP35070 178 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 REG1BP48304 166 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 DYNLT3P51808 116 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 AANATQ16613 207 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 DEFB112Q30KQ8 113 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 MZT2BQ6NZ67 158 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 ZNF818PQ6ZRF7 136 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 ZFAND1Q8TCF1 268 aa16.93■□□□□ 0.3
LSM6-207ENST00000515311 ZNF486Q96H40 463 aaPredicted RBP16.93■□□□□ 0.3
LSM6-207ENST00000515311 SLC25A21Q9BQT8 299 aaPredicted RBP16.93■□□□□ 0.3
LSM6-207ENST00000515311 M0R1X1 148 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 GPR31O00270 319 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 FAM157CP0CG43 387 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 PGAM2P15259 253 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 DEFA1P59665 94 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 DEFA3P59666 94 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 EIF4EBP1Q13541 118 aaPredicted RBP16.92■□□□□ 0.3
LSM6-207ENST00000515311 HABP2Q14520 560 aaPredicted RBP16.92■□□□□ 0.3
LSM6-207ENST00000515311 RBMS2Q15434 407 aaKnown RBP16.92■□□□□ 0.3
LSM6-207ENST00000515311 CMTM1Q8IZ96 169 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 MARCH1Q8TCQ1 289 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 ADTRPQ96IZ2 230 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 SCGB3A2Q96PL1 93 aa16.92■□□□□ 0.3
LSM6-207ENST00000515311 HSD17B10Q99714 261 aaKnown RBP16.92■□□□□ 0.3
LSM6-207ENST00000515311 MRPL20Q9BYC9 149 aaKnown RBP16.92■□□□□ 0.3
LSM6-207ENST00000515311 CCR6P51684 374 aa16.91■□□□□ 0.3
LSM6-207ENST00000515311 BAMBIQ13145 260 aa16.91■□□□□ 0.3
LSM6-207ENST00000515311 DCTN2Q13561 401 aaKnown RBP16.91■□□□□ 0.3
LSM6-207ENST00000515311 ZNF48Q96MX3 618 aaPredicted RBP16.91■□□□□ 0.3
LSM6-207ENST00000515311 NABP2Q9BQ15 211 aa16.91■□□□□ 0.3
LSM6-207ENST00000515311 MDFIC2A0A1B0GVS7 189 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 TIMM23O14925 209 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 NDUFB6O95139 128 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 CTSDP07339 412 aaPredicted RBP16.9■□□□□ 0.3
LSM6-207ENST00000515311 CT45A6P0DMU7 189 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 CT45A5P0DMU8 189 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 CT45A7P0DMV0 189 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 PAX6P26367 422 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 S100GP29377 79 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 SLC6A1P30531 599 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 BRS3P32247 399 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 DUTP33316 252 aaKnown RBP16.9■□□□□ 0.3
LSM6-207ENST00000515311 THBS3P49746 956 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 LRRC75BQ2VPJ9 315 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 ZNF66Q6ZN08 573 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 ZDHHC22Q8N966 263 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 CFHR4Q92496 578 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 GPR132Q9UNW8 380 aa16.9■□□□□ 0.3
LSM6-207ENST00000515311 RND3P61587 244 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 TAGLNQ01995 201 aaKnown RBP16.89■□□□□ 0.29
LSM6-207ENST00000515311 ABCA11PQ4W5N1 156 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 Q6YL49 198 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 MOB3BQ86TA1 216 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 DRAXINQ8NBI3 349 aaPredicted RBP16.89■□□□□ 0.29
LSM6-207ENST00000515311 OR5AN1Q8NGI8 311 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 ZDHHC16Q969W1 377 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 SLC2A9Q9NRM0 540 aa16.89■□□□□ 0.29
LSM6-207ENST00000515311 C14orf166Q9Y224 244 aaKnown RBP16.89■□□□□ 0.29
LSM6-207ENST00000515311 RNF212BA8MTL3 300 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 CD1BP29016 333 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 MC5RP33032 325 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 PHLDA2Q53GA4 152 aa16.88■□□□□ 0.29
LSM6-207ENST00000515311 KCTD9Q7L273 389 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms