RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 MINOS1-NBL1R4GNA1 71 aa10.16□□□□□ -0.78
PDPN-210ENST00000513143 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 LEUTXA8MZ59 168 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 GPR31O00270 319 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 HSD17B6O14756 317 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 CTSDP07339 412 aaPredicted RBP10.15□□□□□ -0.78
PDPN-210ENST00000513143 SAA4P35542 130 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 CEACAM3P40198 252 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 LGALS4P56470 323 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 EIF4EBP1Q13541 118 aaPredicted RBP10.15□□□□□ -0.78
PDPN-210ENST00000513143 RGS21Q2M5E4 152 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 RPL39P5Q59GN2 51 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 FAM71F2Q6NXP2 309 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 LHFPL4Q7Z7J7 247 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 MALSU1Q96EH3 234 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 S1PR3Q99500 378 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 RTBDNQ9BSG5 229 aaPredicted RBP10.15□□□□□ -0.78
PDPN-210ENST00000513143 C5orf66Q9H5L9 145 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 TMEM160Q9NX00 188 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 NUP50Q9UKX7 468 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 SVEP1Q4LDE5 3571 aa10.15□□□□□ -0.78
PDPN-210ENST00000513143 PI3P19957 117 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 RND3P61587 244 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 FAM120AOSQ5T036 256 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 RUSC1-AS1Q66K80 236 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 BRD3OSQ6XYD6 125 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 CMTM1Q8IZ96 169 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 RTN4IP1Q8WWV3 396 aaPredicted RBP10.14□□□□□ -0.79
PDPN-210ENST00000513143 RPEQ96AT9 228 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 C20orf85Q9H1P6 137 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 SLC2A9Q9NRM0 540 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 FLVCR2Q9UPI3 526 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 C14orf166Q9Y224 244 aaKnown RBP10.14□□□□□ -0.79
PDPN-210ENST00000513143 NUBP2Q9Y5Y2 271 aa10.14□□□□□ -0.79
PDPN-210ENST00000513143 OOSP1A8MZH6 123 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 M0R1X1 148 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 TXNL1O43396 289 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 PGLYRP1O75594 196 aaPredicted RBP10.13□□□□□ -0.79
PDPN-210ENST00000513143 GAPDHP04406 335 aaKnown RBP10.13□□□□□ -0.79
PDPN-210ENST00000513143 SPNP16150 400 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 EPHA1P21709 976 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 PIGPP57054 158 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 ZNF816Q0VGE8 651 aaPredicted RBP10.13□□□□□ -0.79
PDPN-210ENST00000513143 ABCA11PQ4W5N1 156 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 PHLDA2Q53GA4 152 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 CLEC9AQ6UXN8 241 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 C9orf139Q6ZV77 190 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 C17orf50Q8WW18 174 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 HSD17B10Q99714 261 aaKnown RBP10.13□□□□□ -0.79
PDPN-210ENST00000513143 NUDT15Q9NV35 164 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 NAV3Q8IVL0 2385 aa10.13□□□□□ -0.79
PDPN-210ENST00000513143 SONP18583 2426 aaKnown RBP10.13□□□□□ -0.79
PDPN-210ENST00000513143 TRAV6A0A075B6T7 132 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 ARPC1BO15143 372 aaKnown RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 RLN1P04808 185 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 H2AFB2P0C5Z0 115 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CT45A6P0DMU7 189 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CT45A5P0DMU8 189 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CT45A7P0DMV0 189 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 S100GP29377 79 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 DUTP33316 252 aaKnown RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 REG1BP48304 166 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 MECP2P51608 486 aaKnown RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 OXA1LQ15070 435 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 SSX2Q16385 188 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 PLET1Q6UQ28 207 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 ZNF66Q6ZN08 573 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 TMED4Q7Z7H5 227 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 SLC25A42Q86VD7 318 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 TGIF2LXQ8IUE1 241 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 OR8H3Q8N146 312 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 DYNAPQ8N1N2 210 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CENPSQ8N2Z9 138 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 CCDC71LQ8N9Z2 235 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 ADAD2Q8NCV1 583 aaKnown RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 TMEM230Q96A57 120 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 GPHA2Q96T91 129 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 NABP2Q9BQ15 211 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 MARVELD1Q9BSK0 173 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 MRPL20Q9BYC9 149 aaKnown RBP10.12□□□□□ -0.79
PDPN-210ENST00000513143 HILPDAQ9Y5L2 63 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 F8P00451 2351 aa10.12□□□□□ -0.79
PDPN-210ENST00000513143 HIVEP2P31629 2446 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 IGHV1-3A0A0C4DH29 117 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 A0A0U1RQK1 487 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 A0A1W2PPI3 338 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 LINC00473A8K010 186 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 MPPED1O15442 326 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 TNFSF12O43508 249 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 HNF1AP20823 631 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 THBS3P49746 956 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 RAG2P55895 527 aa10.11□□□□□ -0.79
PDPN-210ENST00000513143 LINC00205P59089 165 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms