RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CGB3P0DN86 165 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 CGB7P0DN87 165 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 ID3Q02535 119 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 EDDM3AQ14507 147 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 FAM219AQ8IW50 185 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR52L2PQ8NGH6 319 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 HSD17B10Q99714 261 aaKnown RBP10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 LINC00574Q9H8X3 128 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 SAP30LQ9HAJ7 183 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 KCNJ16Q9NPI9 418 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 RNF115Q9Y4L5 304 aa10.89□□□□□ -0.67
DEPDC1B-206ENST00000512452 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 TNFSF12O43508 249 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 FSTL3O95633 263 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 SSTR5P35346 364 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 ADORA2A-AS1P86434 159 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 SLC25A31Q9H0C2 315 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR2D2Q9H210 308 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 COA4Q9NYJ1 87 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 LPAR3Q9UBY5 353 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 PFDN2Q9UHV9 154 aa10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
DEPDC1B-206ENST00000512452 TRGV10A0A0A0MS01 117 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 KBTBD11-OT1A0A1B0GTJ5 212 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 ZNF729A6NN14 1252 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 FAM90A27PA6NNH2 459 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 FAM90A26D6RGX4 464 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 CYB5R3P00387 301 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 TFF1P04155 84 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 PPP1CCP36873 323 aaKnown RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 RAB7AP51149 207 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 HOXA4Q00056 320 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 MEF2CQ06413 473 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 ZNF585BQ52M93 769 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 UBAC2Q8NBM4 344 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 ZNRF1Q8ND25 227 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR10A7Q8NGE5 316 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 UBALD1Q8TB05 177 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 CD300LFQ8TDQ1 290 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 GPR146Q96CH1 333 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 PARP12Q9H0J9 701 aaKnown RBP10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 DYNLRB1Q9NP97 96 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 CALYQ9NYX4 217 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 CLN8Q9UBY8 286 aa10.87□□□□□ -0.67
DEPDC1B-206ENST00000512452 FLNAP21333 2647 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 PPIAL4EA0A075B759 164 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 BORCS7-ASMTA0A0B4J1R7 106 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 PPIAL4DF5H284 164 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 FGF16O43320 207 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 NDUFA2O43678 99 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 PPIAL4FP0DN26 164 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 ARHGDIBP52566 201 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 EDDM3BP56851 147 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 TMEM33P57088 247 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 VAMP2P63027 116 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 CCL8P80075 99 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 BAXQ07812 192 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 MORN2Q502X0 79 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 OR2C3Q8N628 320 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 RNASE11Q8TAA1 199 aaKnown RBP10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 CA5BP1Q8WTZ4 195 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 RNF141Q8WVD5 230 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 NRGNQ92686 78 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 CITED4Q96RK1 184 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 RAB40CQ96S21 281 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 AGMATQ9BSE5 352 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 TMEM204Q9BSN7 226 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 ARV1Q9H2C2 271 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 GNG12Q9UBI6 72 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 FBXL17Q9UF56 701 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 MMP24Q9Y5R2 645 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 CADP27708 2225 aa10.86□□□□□ -0.67
DEPDC1B-206ENST00000512452 hADV38S2A0JD32 116 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 NUDT19A8MXV4 375 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 WRBO00258 174 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 RBFOX2O43251 390 aaKnown RBP eCLIP10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 KCNAB3O43448 404 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 IGKV1-39P01597 117 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 IGKV1D-39P04432 117 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 AGAP20933 346 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 KIR2DS2P43631 304 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 LOXL3P58215 753 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 TAS2R30P59541 319 aa10.85□□□□□ -0.67
DEPDC1B-206ENST00000512452 SWI5Q1ZZU3 235 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms