RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 C20orf196Q8IYI0 205 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 ASB5Q8WWX0 329 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 NEU1Q99519 415 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 ZPBPQ9BS86 351 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 WNT10AQ9GZT5 417 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 ALX4Q9H161 411 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-209ENST00000512055 HKR1P10072 659 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 MUC1P15941 1255 aaPredicted RBP9.44□□□□□ -0.9
CPNE4-209ENST00000512055 ZNF32P17041 273 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 CIRBPQ14011 172 aaKnown RBP9.44□□□□□ -0.9
CPNE4-209ENST00000512055 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 OR8B12Q8NGG6 310 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 FLVCR1-AS1Q8TAF5 88 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 TCFL5Q9UL49 500 aa9.44□□□□□ -0.9
CPNE4-209ENST00000512055 SHISA3A0PJX4 238 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 ANKRD20A5PA0PJZ0 165 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 WNT11O96014 354 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 LPAR6P43657 344 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 GGTLC2Q14390 218 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 SPATA46Q5T0L3 261 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 OR6X1Q8NH79 312 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 CT55Q8WUE5 264 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 TMEM204Q9BSN7 226 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PRR13Q9NZ81 148 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 HOXD4P09016 255 aaPredicted RBP9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PMELP40967 661 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 TNFSF10P50591 281 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PNLIPRP3Q17RR3 467 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 SPANXN1Q5VSR9 72 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 RBPMS2Q6ZRY4 209 aaKnown RBP9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 ZFP64Q9NPA5 681 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 GRIFINA4D1Z8 144 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 TIAF1O95411 115 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 CYC1P08574 325 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 TRGC1P0CF51 173 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 STARD6P59095 220 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 OSR2Q8N2R0 312 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 OR10V1Q8NGI7 309 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 GHITMQ9H3K2 345 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 EDA2RQ9HAV5 297 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PARP11Q9NR21 331 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 C3orf85A0A1B0GTC6 90 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 A0A1W2PQM1 296 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 FCGR3BO75015 233 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 APOMO95445 188 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 CCL2P13500 99 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 KIR3DL2P43630 455 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 GNB2P62879 340 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 MOGAT3Q86VF5 341 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 PP6455Q8WZ26 134 aa9.43□□□□□ -0.9
CPNE4-209ENST00000512055 SPINK2P20155 84 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 MRGPREQ86SM8 312 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 FBXL14Q8N1E6 418 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 OR11G2Q8NGC1 345 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 RTTNQ86VV8 2226 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 NPIPB9F8W1W9 429 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 NPIPB7O75200 414 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 SSPNQ14714 243 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 SNAI3Q3KNW1 292 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 KISS1RQ969F8 398 aaPredicted RBP9.42□□□□□ -0.9
CPNE4-209ENST00000512055 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
CPNE4-209ENST00000512055 ANXA10Q9UJ72 324 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 HILPDAQ9Y5L2 63 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 NOTCH4Q99466 2003 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 GPR179Q6PRD1 2367 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
CPNE4-209ENST00000512055 PPP1R17O96001 155 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 MC5RP33032 325 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 IGLV3-21P80748 117 aaPredicted RBP9.42□□□□□ -0.9
CPNE4-209ENST00000512055 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 PQLC2LA1A4F0 135 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 EGR4Q05215 589 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 VMA21Q3ZAQ7 101 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 KCNS1Q96KK3 526 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 ERRFI1Q9UJM3 462 aaPredicted RBP9.42□□□□□ -0.9
CPNE4-209ENST00000512055 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 PNLIPP16233 465 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 ZNF562Q6V9R5 426 aa9.42□□□□□ -0.9
CPNE4-209ENST00000512055 DPRXA6NFQ7 191 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 KCNAB3O43448 404 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 LINC00614P0C842 121 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 SRIP30626 198 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 SRD5A2P31213 254 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 CKS2P33552 79 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 RPS4XP62701 263 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 DEFB109BQ30KR1 87 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 FAM219AQ8IW50 185 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 LSM10Q969L4 123 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 SNRNP40Q96DI7 357 aaKnown RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 GALNT14Q96FL9 552 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 IP6K3Q96PC2 410 aa9.41□□□□□ -0.9
CPNE4-209ENST00000512055 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
CPNE4-209ENST00000512055 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms