RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 DUX3Q96PT4 197 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 FBXL15Q9H469 300 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 PARP11Q9NR21 331 aa12.94□□□□□ -0.34
DDX41-213ENST00000512027 TRBV6-7A0A0A0MS04 114 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 IGHV7-81A0A0B4J1V7 117 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 TMEM235A6NFC5 223 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 NUDT19A8MXV4 375 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 G3V318 75 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 ATP6V0E1O15342 81 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 NDUFA3O95167 84 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 OR8U9P0C7N5 309 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 TALDO1P37837 337 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 NDPQ00604 133 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 CFHR3Q02985 330 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 KIR2DS1Q14954 304 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 PNLIPRP3Q17RR3 467 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 IDNKQ5T6J7 187 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 ZNF383Q8NA42 475 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 TSPAN14Q8NG11 270 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 NPBQ8NG41 125 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 OR8U1Q8NH10 309 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 SLC25A38Q96DW6 304 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 OR2D2Q9H210 308 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 ZNF221Q9UK13 617 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 WSB1Q9Y6I7 421 aa12.93□□□□□ -0.34
DDX41-213ENST00000512027 OR5H14A6NHG9 310 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 J3QRK9 145 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 M0R1X1 148 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
DDX41-213ENST00000512027 HLA-DRB1P01911 266 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 VDAC1P21796 283 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 LSM3P62310 102 aaKnown RBP12.92□□□□□ -0.34
DDX41-213ENST00000512027 DEFB136Q30KP8 78 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 KPRPQ5T749 579 aaPredicted RBP12.92□□□□□ -0.34
DDX41-213ENST00000512027 TEX38Q6PEX7 206 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 OR5AN1Q8NGI8 311 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 OR10J5Q8NHC4 309 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 KIAA1456Q9P272 454 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 WASHC3Q9Y3C0 194 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 FBXO7Q9Y3I1 522 aa12.92□□□□□ -0.34
DDX41-213ENST00000512027 A0A087WXM4 84 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 FCN1O00602 326 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 RRHO14718 337 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 SSX5O60225 188 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 TNFAIP8O95379 198 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 IGKV1-16P04430 117 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 IGF1P05019 195 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 TFAP2AP05549 437 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 GSTP1P09211 210 aaKnown RBP12.91□□□□□ -0.34
DDX41-213ENST00000512027 SERPINB10P48595 397 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 ZNF260Q3ZCT1 412 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 HACD4Q5VWC8 232 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 MRPL41Q8IXM3 137 aaKnown RBP12.91□□□□□ -0.34
DDX41-213ENST00000512027 COMMD1Q8N668 190 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 LINC00482Q8N8I6 264 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 WFDC9Q8NEX5 89 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 YIPF6Q96EC8 236 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 ST6GALNAC5Q9BVH7 336 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDX41-213ENST00000512027 TPSG1Q9NRR2 321 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 SDHAF2Q9NX18 166 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 GAB2Q9UQC2 676 aa12.91□□□□□ -0.34
DDX41-213ENST00000512027 THBS3P49746 956 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 PLGLAQ15195 96 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 ECSCRQ19T08 205 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 CXorf66Q5JRM2 361 aaPredicted RBP12.9□□□□□ -0.34
DDX41-213ENST00000512027 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 GHITMQ9H3K2 345 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 A3GALT2U3KPV4 340 aa12.9□□□□□ -0.34
DDX41-213ENST00000512027 AIREO43918 545 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 IGHG4P01861 327 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 PTHLHP12272 177 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 DTYMKP23919 212 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 MC5RP33032 325 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 GNG2P59768 71 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 FOXE3Q13461 319 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 PSG5Q15238 335 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 Q6ZS49 121 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 H1FOOQ8IZA3 346 aaPredicted RBP12.89□□□□□ -0.35
DDX41-213ENST00000512027 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 FAM103A1Q9BTL3 118 aaKnown RBP12.89□□□□□ -0.35
DDX41-213ENST00000512027 GON7Q9BXV9 100 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 KLK15Q9H2R5 256 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 SLC35D1Q9NTN3 355 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 ZFP57Q9NU63 452 aa12.89□□□□□ -0.35
DDX41-213ENST00000512027 METTL1Q9UBP6 276 aaKnown RBP12.89□□□□□ -0.35
DDX41-213ENST00000512027 RBM7Q9Y580 266 aaKnown RBP12.89□□□□□ -0.35
DDX41-213ENST00000512027 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 TRAV41A0A0B4J266 112 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 APOA2P02652 100 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 FCER2P06734 321 aa12.88□□□□□ -0.35
DDX41-213ENST00000512027 ELANEP08246 267 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms