RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SLC31A2O15432 143 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 SULT1B1O43704 296 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 DEDDO75618 318 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 GPX5O75715 221 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 SC5DO75845 299 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 NDUFA3O95167 84 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 MAPK3P27361 379 aaPredicted RBP8.76□□□□□ -1.01
RNF4-216ENST00000511859 CALRP27797 417 aaKnown RBP8.76□□□□□ -1.01
RNF4-216ENST00000511859 CD81P60033 236 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 LSM3P62310 102 aaKnown RBP8.76□□□□□ -1.01
RNF4-216ENST00000511859 PPP3R1P63098 170 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 CX3CL1P78423 397 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 TRAM1Q15629 374 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 HSD17B12Q53GQ0 312 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 SUMF2Q8NBJ7 301 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 YIPF6Q96EC8 236 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 NEURL2Q9BR09 285 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 IFT22Q9H7X7 185 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 CKLFQ9UBR5 152 aa8.76□□□□□ -1.01
RNF4-216ENST00000511859 A0A0G2JLM5 398 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 CSN3P07498 182 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 UCHL1P09936 223 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 EGR2P11161 476 aaPredicted RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 IGFBP3P17936 291 aaPredicted RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 PSMA1P25786 263 aaKnown RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 TGFBR1P36897 503 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 MECP2P51608 486 aaKnown RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 NDPQ00604 133 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 DDI2Q5TDH0 399 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 UNQ5815/PRO19632Q6UWF5 114 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 OR13F1Q8NGS4 319 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 GPER1Q99527 375 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 NAA50Q9GZZ1 169 aaKnown RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 TXNL4BQ9NX01 149 aaKnown RBP8.75□□□□□ -1.01
RNF4-216ENST00000511859 GNG12Q9UBI6 72 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 SSR3Q9UNL2 185 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 A3GALT2U3KPV4 340 aa8.75□□□□□ -1.01
RNF4-216ENST00000511859 C13orf42A0A1B0GVH6 325 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 TRDV1A0A1B0GX56 115 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 IZUMO1RA6ND01 250 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 SPINT2O43291 252 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 TRGV3P03979 118 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 SRMP19623 302 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 BDKRB2P30411 391 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 ALDH3B2P48448 385 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 SYNJ2BPP57105 145 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 GPR107Q5VW38 600 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 ZNF529Q6P280 563 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 GPR141Q7Z602 305 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 PPP1R27Q86WC6 154 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 DEFB125Q8N687 156 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 UBALD1Q8TB05 177 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 CCDC107Q8WV48 283 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 CPNE2Q96FN4 548 aaPredicted RBP8.74□□□□□ -1.01
RNF4-216ENST00000511859 CENPOQ9BU64 300 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 FUNDC2Q9BWH2 189 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 SRD5A3Q9H8P0 318 aa8.74□□□□□ -1.01
RNF4-216ENST00000511859 AK6Q9Y3D8 172 aaKnown RBP8.74□□□□□ -1.01
RNF4-216ENST00000511859 OR11H12B2RN74 326 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 AIREO43918 545 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ARL6IP5O75915 188 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 NDUFB8O95169 186 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 MT-ND4P03905 459 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 SNRPBP14678 240 aaKnown RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 MXD1Q05195 221 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 RSU1Q15404 277 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 PIGYQ3MUY2 71 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 LRRTM1Q86UE6 522 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 LFNGQ8NES3 379 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ABHD5Q8WTS1 349 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 THRSPQ92748 146 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 GFI1Q99684 422 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 OVOL2Q9BRP0 275 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 FAM192AQ9GZU8 254 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 TMEM138Q9NPI0 162 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 SLC23A1Q9UHI7 598 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ST3GAL6Q9Y274 331 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ANKRD34BA5PLL1 514 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ZNF785A8K8V0 405 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 H3BUA1 57 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 AIPO00170 330 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 RRHO14718 337 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 OR7C1O76099 320 aaPredicted RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 CDRT1O95170 752 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 CD7P09564 240 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 CLEC2LP0C7M8 214 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ATF4P18848 351 aaPredicted RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 MYL9P24844 172 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 ZNF93P35789 620 aaPredicted RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 RPL5P46777 297 aaKnown RBP8.73□□□□□ -1.01
RNF4-216ENST00000511859 OR10A3P58181 314 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 TNFRSF9Q07011 255 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 PLGLAQ15195 96 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 MORN2Q502X0 79 aa8.73□□□□□ -1.01
RNF4-216ENST00000511859 NHLRC3Q5JS37 347 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms