RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 BET1O15155 118 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 KCNAB3O43448 404 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 SCGNO76038 276 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 OR8U9P0C7N5 309 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 DTYMKP23919 212 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 PNLIPRP3Q17RR3 467 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 COMMD1Q8N668 190 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 DRAXINQ8NBI3 349 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 OR8U1Q8NH10 309 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 SLC25A38Q96DW6 304 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 RNF5Q99942 180 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 DCSTAMPQ9H295 470 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 SPATA2Q9UM82 520 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 ETV7Q9Y603 341 aa12.69□□□□□ -0.38
PDLIM5-216ENST00000511767 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 OR5H14A6NHG9 310 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 NBR2O15453 112 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 SSX5O60225 188 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 IGF1P05019 195 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 LSM3P62310 102 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 PITPNAQ00169 270 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 MMDQ15546 238 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 FAM131AQ6UXB0 335 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 ZNF383Q8NA42 475 aa12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 ZNF107Q9UII5 783 aaPredicted RBP12.68□□□□□ -0.38
PDLIM5-216ENST00000511767 TMEM235A6NFC5 223 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 FCN1O00602 326 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 WIPF1O43516 503 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 NDUFA3O95167 84 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 SLC35B1P78383 322 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 CFHR3Q02985 330 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 TEX38Q6PEX7 206 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 CROCCP3Q8IVE0 287 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 H1FOOQ8IZA3 346 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 SDHAF2Q9NX18 166 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 ZNF580Q9UK33 172 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 WASHC3Q9Y3C0 194 aa12.67□□□□□ -0.38
PDLIM5-216ENST00000511767 A0A0A6YYH2 397 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 IGHV7-81A0A0B4J1V7 117 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 A6NJ64 397 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 H7C2Y5 167 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 RBBP9O75884 186 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 HLA-DRB1P01911 266 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 TFAP2AP05549 437 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 CTXN2P0C2S0 81 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 RPL23AP62750 156 aaKnown RBP12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 C1QL4Q86Z23 238 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 OR13F1Q8NGS4 319 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 NUDCD2Q8WVJ2 157 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 C5orf30Q96GV9 206 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 OR51J1Q9H342 316 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 DIABLOQ9NR28 239 aa12.66□□□□□ -0.38
PDLIM5-216ENST00000511767 G3V4G9 280 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 M0R1X1 148 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 RRHO14718 337 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 PPIFP30405 207 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 GNG2P59768 71 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 PSG5Q15238 335 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 CNIH2Q6PI25 160 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 C18orf65Q6ZTR6 163 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 FBXL15Q9H469 300 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 AUNIPQ9H7T9 357 aa12.65□□□□□ -0.38
PDLIM5-216ENST00000511767 RRP9O43818 475 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 IGHG4P01861 327 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 HLA-DQB1P01920 261 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 IGKV1-16P04430 117 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 ELANEP08246 267 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 SMIM18P0DKX4 95 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 FOXE3Q13461 319 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 ZNF660Q6AZW8 331 aaPredicted RBP12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 S100A16Q96FQ6 103 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 GINS4Q9BRT9 223 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 KIAA1456Q9P272 454 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 ANXA10Q9UJ72 324 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
PDLIM5-216ENST00000511767 G3V318 75 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 XRCC3O43542 346 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 PF4V1P10720 104 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 NCS1P62166 190 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 RPS16P62249 146 aaKnown RBP12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 CX3CL1P78423 397 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 KIAA0141Q14154 515 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 BEAN1Q3B7T3 259 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 KHDC1LQ5JSQ8 128 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 LCNL1Q6ZST4 164 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 GVQW1Q8N7I0 195 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 SLC25A46Q96AG3 418 aa12.63□□□□□ -0.39
PDLIM5-216ENST00000511767 FLYWCH2Q96CP2 140 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms