RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 MSL2Q9HCI7 577 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 VAX2Q9UIW0 290 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
SEC31A-227ENST00000508502 IGHV3-43A0A0B4J1X8 118 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 LRRC30A6NM36 301 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 HMGB3O15347 200 aaKnown RBP8.19□□□□□ -1.1
SEC31A-227ENST00000508502 NKX2-8O15522 239 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 IGHV3-43DP0DP04 118 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
SEC31A-227ENST00000508502 VWA1Q6PCB0 445 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 RFESDQ8TAC1 157 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 LHX4Q969G2 390 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 PARD6GQ9BYG4 376 aaPredicted RBP8.19□□□□□ -1.1
SEC31A-227ENST00000508502 GSN-AS1Q9NRJ2 163 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.19□□□□□ -1.1
SEC31A-227ENST00000508502 METRNQ9UJH8 293 aa8.19□□□□□ -1.1
SEC31A-227ENST00000508502 PRR14LQ5THK1 2151 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 OR5H1A6NKK0 313 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 RBMXL2O75526 392 aaKnown RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 PTBP3O95758 552 aaKnown RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 IFNA1P01562 189 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 IGKV1D-33P01593 117 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 IGKV1-33P01594 117 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 SSTR5P35346 364 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 SRSF6Q13247 344 aaKnown RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 WDR82Q6UXN9 313 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 RPP25LQ8N5L8 163 aaKnown RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 WDR31Q8NA23 367 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 TMPRSS5Q9H3S3 457 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 PCNX2A6NKB5 2137 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 DEFB108AA8MXU0 73 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 ZNF737O75373 536 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 P0C879 139 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 HOXA5P20719 270 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 LINC00205P59089 165 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 TLE1Q04724 770 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 PNRC1Q12796 327 aaPredicted RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 ACSF3Q4G176 576 aaPredicted RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 FDCSPQ8NFU4 85 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 ZDHHC16Q969W1 377 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 P2RX4Q99571 388 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 DOK5Q9P104 306 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 USF3Q68DE3 2245 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 LINC00587B1AMM8 73 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 ZG16O60844 167 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 IGKV3-15P01624 115 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 IGHG3P01860 377 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 KIR2DL2P43627 348 aaPredicted RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 COL10A1Q03692 680 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 EIF4EBP1Q13541 118 aaPredicted RBP8.18□□□□□ -1.1
SEC31A-227ENST00000508502 SPINK9Q5DT21 86 aa8.18□□□□□ -1.1
SEC31A-227ENST00000508502 TRGC2P03986 189 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 ACSM6Q6P461 480 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 H2BFWTQ7Z2G1 175 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 C9orf106Q8NAJ2 232 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 OR13A1Q8NGR1 328 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 DTD1Q8TEA8 209 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 SDF2L1Q9HCN8 221 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 MIOXQ9UGB7 285 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 BDP1A6H8Y1 2624 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 CLDN34H7C241 214 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 CYB5R3P00387 301 aaPredicted RBP8.17□□□□□ -1.1
SEC31A-227ENST00000508502 CECR9P0C854 216 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 GUSBP1Q15486 140 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 TRIP6Q15654 476 aaKnown RBP8.17□□□□□ -1.1
SEC31A-227ENST00000508502 LTC4SQ16873 150 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 Q3ZCU0 254 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 OR10P1Q8NGE3 313 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 DCTN5Q9BTE1 182 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 TOLLIPQ9H0E2 274 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 TIMM9Q9Y5J7 89 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 CLDN14O95500 239 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 FGF7P21781 194 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 C1orf87Q8N0U7 546 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 FAM210BQ96KR6 192 aa8.17□□□□□ -1.1
SEC31A-227ENST00000508502 DOCK11Q5JSL3 2073 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 LINC00473A8K010 186 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BKO60814 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BJP06899 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 COX5AP20674 150 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BOP23527 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 GCH1P30793 250 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BBP33778 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 CDX1P47902 265 aaPredicted RBP8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BDP58876 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST1H2BCP62807 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 FOXF2Q12947 444 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 EDDM3AQ14507 147 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST2H2BEQ16778 126 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 ATP6V1FQ16864 119 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
SEC31A-227ENST00000508502 SPNS3Q6ZMD2 512 aa8.16□□□□□ -1.1
SEC31A-227ENST00000508502 PRR7Q8TB68 274 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms