RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 MED22Q15528 200 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 CD200R1LQ6Q8B3 271 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 OVCH2Q7RTZ1 564 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 PPP1R27Q86WC6 154 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 DRAXINQ8NBI3 349 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 OR5AN1Q8NGI8 311 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 EDARADDQ8WWZ3 215 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 GFI1Q99684 422 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 AGMATQ9BSE5 352 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 URM1Q9BTM9 101 aaKnown RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 C11orf54Q9H0W9 315 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 RIMS4Q9H426 269 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 METTL1Q9UBP6 276 aaKnown RBP8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
HMGCS1-204ENST00000507293 C3orf84H3BNL1 204 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 HSPA12AO43301 675 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 CA2P00918 260 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 SCTP09683 121 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 SNRPBP14678 240 aaKnown RBP8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 GP9P14770 177 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 CPEP16870 476 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 ZBTB25P24278 435 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 CEACAM6P40199 344 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 TPPP2P59282 170 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 PITPNAQ00169 270 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 PSG5Q15238 335 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 ACTBL2Q562R1 376 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 LIPKQ5VXJ0 399 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 PYHIN1Q6K0P9 492 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 SBSPONQ8IVN8 264 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 OR6Q1Q8NGQ2 317 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 UFD1Q92890 307 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 MS4A10Q96PG2 267 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 RNF5Q99942 180 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 VCXQ9H320 206 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 GHITMQ9H3K2 345 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 PLGRKTQ9HBL7 147 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 Q9N2K0 584 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 C12orf4Q9NQ89 552 aa8.9□□□□□ -0.98
HMGCS1-204ENST00000507293 FOXI3A8MTJ6 420 aaPredicted RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 SLC17A2O00624 439 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 PROP1O75360 226 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 SPDEFO95238 335 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 HSPB1P04792 205 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 OR8U9P0C7N5 309 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 FRMD6-AS1P0C7T7 363 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 ARSBP15848 533 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 LINC00205P59089 165 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 RPS25P62851 125 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 IRF3Q14653 427 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 RAB11BQ15907 218 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 AKIRIN2Q53H80 203 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 ZNF383Q8NA42 475 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 LFNGQ8NES3 379 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 FLYWCH2Q96CP2 140 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 ARHGAP5-AS1Q96IT6 56 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 RCHY1Q96PM5 261 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 TSNAXQ99598 290 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 SCN3BQ9NY72 215 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 ZNF221Q9UK13 617 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 HSF4Q9ULV5 492 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 MGAT4AQ9UM21 535 aa8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 AK6Q9Y3D8 172 aaKnown RBP8.89□□□□□ -0.99
HMGCS1-204ENST00000507293 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 TRIM64CA6NLI5 447 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 SLC25A17O43808 307 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 APOA2P02652 100 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 TRGV3P03979 118 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 IGKV1-16P04430 117 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 TFAP2AP05549 437 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 CD40LGP29965 261 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 VEGFCP49767 419 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 TMEM50BP56557 158 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 CLDN12P56749 244 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 RPS16P62249 146 aaKnown RBP8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 SRSF7Q16629 238 aaKnown RBP eCLIP8.88□□□□□ -0.998e-8■□□□□ 10.4
HMGCS1-204ENST00000507293 ZNF562Q6V9R5 426 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 TMEM91Q6ZNR0 172 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 HAPLN4Q86UW8 402 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 PDPNQ86YL7 162 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 MUC7Q8TAX7 377 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 PTX4Q96A99 478 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 RHOVQ96L33 236 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 CMSS1Q9BQ75 279 aaKnown RBP8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 PECRQ9BY49 303 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 SLA2Q9H6Q3 261 aa8.88□□□□□ -0.99
HMGCS1-204ENST00000507293 HUWE1Q7Z6Z7 4374 aaKnown RBP8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 M0R1X1 148 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 ARPC1BO15143 372 aaKnown RBP8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 ARL6IP5O75915 188 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 HSMCR30P0CW71 290 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 TPBGQ13641 420 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 FXYD3Q14802 87 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 PLAC9Q5JTB6 97 aa8.87□□□□□ -0.99
HMGCS1-204ENST00000507293 ZNF355PQ9NSJ1 428 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms