RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-209ENST00000506630 OR8U9P0C7N5 309 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 CT45A6P0DMU7 189 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 CT45A5P0DMU8 189 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 CT45A7P0DMV0 189 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 CD28P10747 220 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 PTHLHP12272 177 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 RORCP51449 518 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 F2RL1P55085 397 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 ACTBP60709 375 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 TMEM69Q5SWH9 247 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 KPRPQ5T749 579 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-209ENST00000506630 Q8N9W7 124 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 OR8U1Q8NH10 309 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 AUNIPQ9H7T9 357 aa10.39□□□□□ -0.75
TCOF1-209ENST00000506630 LIN7CQ9NUP9 197 aaKnown RBP10.39□□□□□ -0.75
TCOF1-209ENST00000506630 OR5H14A6NHG9 310 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 J3QRK9 145 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 M0R1X1 148 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 XRCC3O43542 346 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 OPN1MWP04001 364 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 EIF4EP06730 217 aaKnown RBP10.38□□□□□ -0.75
TCOF1-209ENST00000506630 OPN1MW2P0DN77 364 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 OPN1MW3P0DN78 364 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 TAS2R20P59543 309 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 ARPC4P59998 168 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 SAMD5Q5TGI4 173 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 SLC35E3Q7Z769 313 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 CENPVQ7Z7K6 275 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-209ENST00000506630 CLVS1Q8IUQ0 354 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-209ENST00000506630 H1FOOQ8IZA3 346 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-209ENST00000506630 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 DRAXINQ8NBI3 349 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-209ENST00000506630 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 MRAPQ8TCY5 172 aa10.38□□□□□ -0.75
TCOF1-209ENST00000506630 MEIS3P1A6NDR6 274 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 H0YJW9 148 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 H7C2Y5 167 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 NBR2O15453 112 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 FCER2P06734 321 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 NFYAP23511 347 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-209ENST00000506630 CNTFRP26992 372 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 FAM71E2Q8N5Q1 922 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-209ENST00000506630 BEST4Q8NFU0 473 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 OR5AU1Q8NGC0 362 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-209ENST00000506630 ACOT12Q8WYK0 555 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 AP3S1Q92572 193 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 RITA1Q96K30 269 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 IFT46Q9NQC8 304 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 PLSCR3Q9NRY6 295 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 SDHAF2Q9NX18 166 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 KIAA1456Q9P272 454 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 ANXA10Q9UJ72 324 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 LINC00527Q9UJ94 153 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 WASHC3Q9Y3C0 194 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
TCOF1-209ENST00000506630 PSMB11A5LHX3 300 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 HPGDSO60760 199 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 NOL3O60936 208 aaKnown RBP10.36□□□□□ -0.75
TCOF1-209ENST00000506630 PROP1O75360 226 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 IGHG2P01859 326 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 APOA2P02652 100 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 CTXN2P0C2S0 81 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 MC5RP33032 325 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 CBX5P45973 191 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 NSUN5P1Q3KNT7 163 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 MZT2AQ6P582 158 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 C10orf99Q6UWK7 81 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 HOGA1Q86XE5 327 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 FOXRED2Q8IWF2 684 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 OR4X2Q8NGF9 303 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 OR5AN1Q8NGI8 311 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 CHPT1Q8WUD6 406 aa10.36□□□□□ -0.75
TCOF1-209ENST00000506630 NOL4LQ96MY1 436 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-209ENST00000506630 CITED2Q99967 270 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-209ENST00000506630 LINC01548A6NM66 108 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 FAM25AB3EWG3 89 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 FAM25CB3EWG5 89 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 FAM25GB3EWG6 89 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 APOA1P02647 267 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 ZNF182P17025 639 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-209ENST00000506630 SOX6P35712 828 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 RPL5P46777 297 aaKnown RBP10.35□□□□□ -0.75
TCOF1-209ENST00000506630 LUMP51884 338 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-209ENST00000506630 LINC00205P59089 165 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 SPCS2Q15005 226 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 KHDC1LQ5JSQ8 128 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 ZNF383Q8NA42 475 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 RAB2BQ8WUD1 216 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 CMTM3Q96MX0 182 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 HSPB9Q9BQS6 159 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 SLC35D1Q9NTN3 355 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 OR2W1Q9Y3N9 320 aa10.35□□□□□ -0.75
TCOF1-209ENST00000506630 SMIM31A0A1B0GVY4 71 aa10.34□□□□□ -0.75
TCOF1-209ENST00000506630 A0A1W2PRX2 142 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms