RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TOLLIPQ9H0E2 274 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 C11orf54Q9H0W9 315 aaPredicted RBP5.81□□□□□ -1.48
GYPB-206ENST00000506516 RDH8Q9NYR8 311 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 ZNF221Q9UK13 617 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 MOB4Q9Y3A3 225 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 RBM7Q9Y580 266 aaKnown RBP5.81□□□□□ -1.48
GYPB-206ENST00000506516 COL6A5A8TX70 2615 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 DSCAML1Q8TD84 2053 aa5.81□□□□□ -1.48
GYPB-206ENST00000506516 SAA2-SAA4A0A096LPE2 208 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 TRBV6-7A0A0A0MS04 114 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 IGHV3-72A0A0B4J1Y9 119 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 IGKV1-6A0A0C4DH72 117 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 NCBP2LA6PVI3 153 aaKnown RBP5.8□□□□□ -1.48
GYPB-206ENST00000506516 FGF16O43320 207 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 APOA1P02647 267 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 SAA2P0DJI9 122 aaPredicted RBP5.8□□□□□ -1.48
GYPB-206ENST00000506516 ZNF182P17025 639 aaPredicted RBP5.8□□□□□ -1.48
GYPB-206ENST00000506516 MC5RP33032 325 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 GPR12P47775 334 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 PROK1P58294 105 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 ABCA11PQ4W5N1 156 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 IGSF11Q5DX21 431 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 TMEM69Q5SWH9 247 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 CNIH2Q6PI25 160 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 ZNF833PQ6ZTB9 187 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 ODF3L1Q8IXM7 274 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 IZUMO1Q8IYV9 350 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 Q8N2B8 174 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 OR8H1Q8NGG4 311 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 SGMS2Q8NHU3 365 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 NUDCD2Q8WVJ2 157 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 NABP2Q9BQ15 211 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 BCL7BQ9BQE9 202 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 NAA50Q9GZZ1 169 aaKnown RBP5.8□□□□□ -1.48
GYPB-206ENST00000506516 AUNIPQ9H7T9 357 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 OR1A1Q9P1Q5 309 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 ELF5Q9UKW6 265 aaPredicted RBP5.8□□□□□ -1.48
GYPB-206ENST00000506516 RNF150Q9ULK6 438 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 GAB2Q9UQC2 676 aa5.8□□□□□ -1.48
GYPB-206ENST00000506516 FAM25AB3EWG3 89 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 FAM25CB3EWG5 89 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 FAM25GB3EWG6 89 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ZNF736B4DX44 427 aaPredicted RBP5.79□□□□□ -1.48
GYPB-206ENST00000506516 SLC22A5O76082 557 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 OR8U9P0C7N5 309 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 VSIG10L2P0DP72 767 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 PRSS3P35030 304 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 VDAC2P45880 294 aaPredicted RBP5.79□□□□□ -1.48
GYPB-206ENST00000506516 OR3A3P47888 321 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 TAS2R20P59543 309 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ARPC4P59998 168 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 HERPUD1Q15011 391 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 C9orf152Q5JTZ5 239 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 CENPVQ7Z7K6 275 aaPredicted RBP5.79□□□□□ -1.48
GYPB-206ENST00000506516 HOGA1Q86XE5 327 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.79□□□□□ -1.48
GYPB-206ENST00000506516 BEST4Q8NFU0 473 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 OR8U1Q8NH10 309 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ABHD14BQ96IU4 210 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 RASL11BQ9BPW5 248 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 AGMATQ9BSE5 352 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 CABLES2Q9BTV7 478 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 IFI27L2Q9H2X8 130 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ZNF702PQ9H963 129 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 IFT46Q9NQC8 304 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 ANXA10Q9UJ72 324 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 MRPS7Q9Y2R9 242 aaKnown RBP5.79□□□□□ -1.48
GYPB-206ENST00000506516 SIGLEC9Q9Y336 463 aa5.79□□□□□ -1.48
GYPB-206ENST00000506516 KIAA2026Q5HYC2 2103 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 IGKV1D-8A0A087WSZ0 117 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 OR5H14A6NHG9 310 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 H7C2Y5 167 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 SSX5O60225 188 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 HPGDSO60760 199 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 AMY1AP04745 511 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 AMY2AP04746 511 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 CT45A6P0DMU7 189 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 CT45A5P0DMU8 189 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 CT45A7P0DMV0 189 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 LSAMPQ13449 338 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 RPL39P5Q59GN2 51 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 KLHDC1Q8N7A1 406 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 C5orf56Q8N8D9 126 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 C15orf40Q8WUR7 153 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 RNF5Q99942 180 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 CITED1Q99966 193 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 ZNF251Q9BRH9 671 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 MRPL20Q9BYC9 149 aaKnown RBP5.78□□□□□ -1.48
GYPB-206ENST00000506516 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 PARP12Q9H0J9 701 aaKnown RBP5.78□□□□□ -1.48
GYPB-206ENST00000506516 SERTAD4Q9NUC0 356 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 NECAP2Q9NVZ3 263 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 OR2W1Q9Y3N9 320 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 ANK2Q01484 3957 aa5.78□□□□□ -1.48
GYPB-206ENST00000506516 CCDC160A6NGH7 325 aa5.77□□□□□ -1.49
GYPB-206ENST00000506516 J3QRK9 145 aa5.77□□□□□ -1.49
GYPB-206ENST00000506516 M0R1X1 148 aa5.77□□□□□ -1.49
GYPB-206ENST00000506516 SULT1C2O00338 296 aa5.77□□□□□ -1.49
GYPB-206ENST00000506516 RGS5O15539 181 aa5.77□□□□□ -1.49
GYPB-206ENST00000506516 KCNAB3O43448 404 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms