RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 WASHC3Q9Y3C0 194 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 ETV7Q9Y603 341 aa12.24□□□□□ -0.45
MED28-204ENST00000506409 PLXNB1O43157 2135 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 G3V4G9 280 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 AIREO43918 545 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 PF4P02776 101 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 GSTP1P09211 210 aaKnown RBP12.23□□□□□ -0.45
MED28-204ENST00000506409 VDAC1P21796 283 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 RPL23AP62750 156 aaKnown RBP12.23□□□□□ -0.45
MED28-204ENST00000506409 C5orf64Q2M2E5 130 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 TEX38Q6PEX7 206 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 Q6ZS49 121 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 DRAXINQ8NBI3 349 aaPredicted RBP12.23□□□□□ -0.45
MED28-204ENST00000506409 NPBQ8NG41 125 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 OR5AN1Q8NGI8 311 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 NOTCH3Q9UM47 2321 aa12.23□□□□□ -0.45
MED28-204ENST00000506409 PROP1O75360 226 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 NDUFA3O95167 84 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 HLA-DRB1P01911 266 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 IGF1P05019 195 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 TFAP2AP05549 437 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 OR8U9P0C7N5 309 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 GNG2P59768 71 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 PITPNAQ00169 270 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 PNLIPRP3Q17RR3 467 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.22□□□□□ -0.45
MED28-204ENST00000506409 OR5H6Q8NGV6 325 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 OR8U1Q8NH10 309 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 NUDCD2Q8WVJ2 157 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 YIPF6Q96EC8 236 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 ST6GALNAC5Q9BVH7 336 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 OR2D2Q9H210 308 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 DCSTAMPQ9H295 470 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 ZFP57Q9NU63 452 aa12.22□□□□□ -0.45
MED28-204ENST00000506409 IGKV1D-8A0A087WSZ0 117 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 NUDT19A8MXV4 375 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 M0R1X1 148 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 RBBP9O75884 186 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 OR5H8P0DN80 308 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 CD33P20138 364 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 TGFBR1P36897 503 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 LINC00205P59089 165 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 LSM3P62310 102 aaKnown RBP12.21□□□□□ -0.45
MED28-204ENST00000506409 PLGLAQ15195 96 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 ZNF260Q3ZCT1 412 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 CXorf66Q5JRM2 361 aaPredicted RBP12.21□□□□□ -0.45
MED28-204ENST00000506409 LIN54Q6MZP7 749 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 SLC25A38Q96DW6 304 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 OR51J1Q9H342 316 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 ZNF580Q9UK33 172 aa12.21□□□□□ -0.45
MED28-204ENST00000506409 RBM7Q9Y580 266 aaKnown RBP12.21□□□□□ -0.45
MED28-204ENST00000506409 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 TRIM64CA6NLI5 447 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 RRHO14718 337 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 TMEM127O75204 238 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 APOA2P02652 100 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 CFHR3Q02985 330 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 FOXE3Q13461 319 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
MED28-204ENST00000506409 OXLD1Q5BKU9 147 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 PDPNQ86YL7 162 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 CROCCP3Q8IVE0 287 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 H1FOOQ8IZA3 346 aaPredicted RBP12.2□□□□□ -0.46
MED28-204ENST00000506409 KLHL30-AS1Q8NEE0 82 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 RNF5Q99942 180 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 FBXL15Q9H469 300 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 PARP11Q9NR21 331 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 SDHAF2Q9NX18 166 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 SPATA2Q9UM82 520 aa12.2□□□□□ -0.46
MED28-204ENST00000506409 TRAV18A0A075B6X5 111 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 A0A0A6YYH2 397 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 A6NJ64 397 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 ATP6V0E1O15342 81 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 SSX5O60225 188 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 IGHG4P01861 327 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 IGKV1-16P04430 117 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 RPLP1P05386 114 aaKnown RBP12.19□□□□□ -0.46
MED28-204ENST00000506409 ELANEP08246 267 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 CTXN2P0C2S0 81 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 SLC6A1P30531 599 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 BEAN1Q3B7T3 259 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 LCNL1Q6ZST4 164 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 C18orf65Q6ZTR6 163 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 C8orf86Q6ZUL3 223 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 ZNF695Q8IW36 515 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 WFDC9Q8NEX5 89 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 DIABLOQ9NR28 239 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 GAB2Q9UQC2 676 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 WSB1Q9Y6I7 421 aa12.19□□□□□ -0.46
MED28-204ENST00000506409 RPS19P39019 145 aaKnown RBP12.18□□□□□ -0.46
MED28-204ENST00000506409 RPS16P62249 146 aaKnown RBP12.18□□□□□ -0.46
MED28-204ENST00000506409 KPRPQ5T749 579 aaPredicted RBP12.18□□□□□ -0.46
MED28-204ENST00000506409 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
MED28-204ENST00000506409 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
MED28-204ENST00000506409 TSNAXQ99598 290 aaKnown RBP12.18□□□□□ -0.46
MED28-204ENST00000506409 SLC35D1Q9NTN3 355 aa12.18□□□□□ -0.46
MED28-204ENST00000506409 METTL1Q9UBP6 276 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms