RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TNFRSF14Q92956 283 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 C18orf12Q96KH6 178 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 OR2A7Q96R45 310 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 PIMREGQ9BSJ6 248 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 SIRPDQ9H106 197 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 MED28Q9H204 178 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 BEX4Q9NWD9 120 aaPredicted RBP8.48□□□□□ -1.05
TPM3-217ENST00000504663 GNG12Q9UBI6 72 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 MGAT4CQ9UBM8 478 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 GAB2Q9UQC2 676 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 SESN1Q9Y6P5 492 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
TPM3-217ENST00000504663 PRRC2AP48634 2157 aaKnown RBP8.48□□□□□ -1.05
TPM3-217ENST00000504663 LOC105371242A0A075B767 164 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SAA2-SAA4A0A096LPE2 208 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 IGHV2-70DA0A0C4DH43 119 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 C3orf85A0A1B0GTC6 90 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 MPTX1A8MV57 137 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SSNA1O43805 119 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ADAP1O75689 374 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 CCNKO75909 580 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SIX6O95475 246 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 IFNA2P01563 188 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 IGLV1-47P01700 117 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SAA2P0DJI9 122 aaPredicted RBP8.47□□□□□ -1.05
TPM3-217ENST00000504663 F2RP25116 425 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 DUTP33316 252 aaKnown RBP8.47□□□□□ -1.05
TPM3-217ENST00000504663 GNG10P50151 68 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ZNF137PP52743 207 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 CD83Q01151 205 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 IL15RAQ13261 267 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ABCA11PQ4W5N1 156 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ESCO2Q56NI9 601 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 RPL39P5Q59GN2 51 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 LDLRAD2Q5SZI1 272 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 CLEC2AQ6UVW9 174 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 LIAT1Q6ZQX7 453 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ZNF833PQ6ZTB9 187 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 KCTD9Q7L273 389 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SGPP2Q8IWX5 399 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 KIR3DL3Q8N743 410 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ZBTB34Q8NCN2 500 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 ST6GALNAC6Q969X2 333 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 SUCNR1Q9BXA5 334 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 TMEM133Q9H2Q1 129 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 RAB9BQ9NP90 201 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 MMP26Q9NRE1 261 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 HECTD1Q9ULT8 2610 aa8.47□□□□□ -1.05
TPM3-217ENST00000504663 MED13LQ71F56 2210 aa8.46□□□□□ -1.05
TPM3-217ENST00000504663 A0A0G2JRQ6 117 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 TEX13DA0A0J9YY54 714 aaPredicted RBP8.46□□□□□ -1.06
TPM3-217ENST00000504663 ODF3BA8MYP8 253 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 SMLR1H3BR10 107 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 M0R1W7 72 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 GOSR2O14653 212 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 PFDN1O60925 122 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 RGS11O94810 467 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 LIPFP07098 398 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 P0C879 139 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 NFYBP25208 207 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 DIAPH2-AS1Q14236 149 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 CLEC12BQ2HXU8 276 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 Q5BKY6 102 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 BTNL3Q6UXE8 466 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 SELENOHQ8IZQ5 122 aaKnown RBP8.46□□□□□ -1.06
TPM3-217ENST00000504663 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.46□□□□□ -1.06
TPM3-217ENST00000504663 TBX15Q96SF7 602 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 ZNF436Q9C0F3 470 aaPredicted RBP8.46□□□□□ -1.06
TPM3-217ENST00000504663 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 UNKLQ9H9P5 680 aaKnown RBP8.46□□□□□ -1.06
TPM3-217ENST00000504663 KCNS2Q9ULS6 477 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 ITPR2Q14571 2701 aa8.46□□□□□ -1.06
TPM3-217ENST00000504663 TRAV14DV4A0A0A6YYC5 116 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 J3QR06 171 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 CDS2O95674 445 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 GIPP09681 153 aaPredicted RBP8.45□□□□□ -1.06
TPM3-217ENST00000504663 HOXB4P17483 251 aaPredicted RBP8.45□□□□□ -1.06
TPM3-217ENST00000504663 RAB7AP51149 207 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 DSCR9P59020 149 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 LCN2P80188 198 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 LYZL2Q7Z4W2 148 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 OR4P4Q8NGL7 312 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 OR51H1Q8NH63 302 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 RBMXL1Q96E39 390 aaKnown RBP8.45□□□□□ -1.06
TPM3-217ENST00000504663 OR10C1Q96KK4 312 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 PHB2Q99623 299 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 RAB18Q9NP72 206 aa8.45□□□□□ -1.06
TPM3-217ENST00000504663 LY6LH3BQJ8 138 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 ENSAO43768 121 aaKnown RBP8.44□□□□□ -1.06
TPM3-217ENST00000504663 RAMP3O60896 148 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 SLC22A5O76082 557 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 IGKV1-5P01602 117 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 CT45A6P0DMU7 189 aa8.44□□□□□ -1.06
TPM3-217ENST00000504663 CT45A5P0DMU8 189 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms