RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 WASHC3Q9Y3C0 194 aa16.7■□□□□ 0.26
TRAPPC11-203ENST00000504526 TRIM64CA6NLI5 447 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 LINC01548A6NM66 108 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 H0YJW9 148 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 NDUFA3O95167 84 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 PNLIPRP3Q17RR3 467 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 TEX38Q6PEX7 206 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 MAFIPQ8WZ33 124 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 RNF150Q9ULK6 438 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 GAB2Q9UQC2 676 aa16.69■□□□□ 0.26
TRAPPC11-203ENST00000504526 A0A0A6YYH2 397 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 A6NJ64 397 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 H7C2Y5 167 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 HLA-DRB1P01911 266 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 IGF1P05019 195 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 TFAP2AP05549 437 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR5H8P0DN80 308 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 SLC6A1P30531 599 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 GNG2P59768 71 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 C5orf64Q2M2E5 130 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 ZNF260Q3ZCT1 412 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 HSPB9Q9BQS6 159 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 GINS4Q9BRT9 223 aa16.68■□□□□ 0.26
TRAPPC11-203ENST00000504526 TMEM235A6NFC5 223 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 PROP1O75360 226 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 CTXN2P0C2S0 81 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 VDAC1P21796 283 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 RPL23AP62750 156 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 GLDNQ6ZMI3 551 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 SLC25A38Q96DW6 304 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 RBMXL1Q96E39 390 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 RITA1Q96K30 269 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 ELF5Q9UKW6 265 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 SPATA2Q9UM82 520 aa16.67■□□□□ 0.26
TRAPPC11-203ENST00000504526 APOA2P02652 100 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 PF4P02776 101 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 ELANEP08246 267 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR8U9P0C7N5 309 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 CNTFRP26992 372 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 LIN54Q6MZP7 749 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR5H6Q8NGV6 325 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR8U1Q8NH10 309 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 ST6GALNAC5Q9BVH7 336 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR2D2Q9H210 308 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 DIABLOQ9NR28 239 aa16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 RBM7Q9Y580 266 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-203ENST00000504526 NOTCH1P46531 2555 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 M0R1X1 148 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 RRHO14718 337 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 TAGLNQ01995 201 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 FOXE3Q13461 319 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 CXorf66Q5JRM2 361 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 PDPNQ86YL7 162 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 DRAXINQ8NBI3 349 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 WFDC9Q8NEX5 89 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 NUDCD2Q8WVJ2 157 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 OR51J1Q9H342 316 aa16.65■□□□□ 0.26
TRAPPC11-203ENST00000504526 SPDEFO95238 335 aa16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 CD33P20138 364 aa16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 SAMD5Q5TGI4 173 aa16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 CNIH2Q6PI25 160 aa16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 H1FOOQ8IZA3 346 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 ZNF383Q8NA42 475 aa16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 TSNAXQ99598 290 aaKnown RBP16.64■□□□□ 0.25
TRAPPC11-203ENST00000504526 TRAV18A0A075B6X5 111 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 IGKV1D-8A0A087WSZ0 117 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 IGHV7-81A0A0B4J1V7 117 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 WIPF1O43516 503 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 IGHG4P01861 327 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 RPS19P39019 145 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 LSM3P62310 102 aaKnown RBP16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 CFHR3Q02985 330 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 PLGLAQ15195 96 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 ZNF660Q6AZW8 331 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 C1QL4Q86Z23 238 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 RNF152Q8N8N0 203 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 SLC35D1Q9NTN3 355 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 SDHAF2Q9NX18 166 aa16.63■□□□□ 0.25
TRAPPC11-203ENST00000504526 NUDT19A8MXV4 375 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 G3V4G9 280 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 TGFBR1P36897 503 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 THBS3P49746 956 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 CBX3Q13185 183 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 FLYWCH2Q96CP2 140 aaKnown RBP16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 ADTRPQ96IZ2 230 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 FUNDC2Q9BWH2 189 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 FBXL15Q9H469 300 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 ANXA10Q9UJ72 324 aa16.62■□□□□ 0.25
TRAPPC11-203ENST00000504526 ATP6V0E1O15342 81 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 SSX5O60225 188 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 RPS16P62249 146 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 BEAN1Q3B7T3 259 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 PDLIM3Q53GG5 364 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 KPRPQ5T749 579 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 ZNF695Q8IW36 515 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 KLHL30-AS1Q8NEE0 82 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 OR13F1Q8NGS4 319 aa16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 KCTD12Q96CX2 325 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 S100A16Q96FQ6 103 aaKnown RBP16.61■□□□□ 0.25
TRAPPC11-203ENST00000504526 PARP11Q9NR21 331 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms