RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PSENENQ9NZ42 101 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 FBXL17Q9UF56 701 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 TP73-AS1Q9UF72 201 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 WIPI2Q9Y4P8 454 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 PTPRBP23467 1997 aa3.17□□□□□ -1.9
PCDH11X-208ENST00000504220 TRBV5-3A0A0A0MS03 114 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TGIF2-C20orf24A0A0A6YYL0 155 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 IGHV3-43A0A0B4J1X8 118 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF814B7Z6K7 855 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 C17orf112F2Z3M2 114 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 H0YL77 283 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GEMIN2O14893 280 aaKnown RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GLSO94925 669 aaPredicted RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 IGLV3-27P01718 113 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 IGHV3-43DP0DP04 118 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF17P17021 662 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CA6P23280 308 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 RPL34P49207 117 aaKnown RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 UBE2G1P62253 170 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SRSF1Q07955 248 aaKnown RBP eCLIP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 PJVKQ0ZLH3 352 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TIGITQ495A1 244 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF585BQ52M93 769 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TMEM128Q5BJH2 165 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LYSMD4Q5XG99 296 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 C12orf73Q69YU5 71 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TMEM92Q6UXU6 159 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ADAMTSL4Q6UY14 1074 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 DOK3Q7L591 496 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SFTPA2Q8IWL1 248 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SYS1Q8N2H4 156 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LINC01555Q8NAE3 123 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZBTB34Q8NCN2 500 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 DYRK2Q92630 601 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SPATA25Q9BR10 227 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LPAR5Q9H1C0 372 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SRD5A3Q9H8P0 318 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 BCL2L10Q9HD36 194 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC7A10Q9NS82 523 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 FZR1Q9UM11 496 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 NSG2Q9Y328 171 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LIPGQ9Y5X9 500 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 PRR19A6NJB7 356 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GCGP01275 180 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 IGHG3P01860 377 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CT62P0C5K7 136 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CTLA4P16410 223 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TNFRSF1AP19438 455 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 EDN2P20800 178 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 APOBEC1P41238 236 aaKnown RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GFRA1P56159 465 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SUMO1P63165 101 aaKnown RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 MPV17LQ2QL34 196 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CEACAM16Q2WEN9 425 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 PIP4P2Q8N4L2 257 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 DTWD2Q8NBA8 298 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CCDC74AQ96AQ1 378 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GPHA2Q96T91 129 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ATP5SQ99766 215 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ARHGDIGQ99819 225 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CITED1Q99966 193 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 NUDT9Q9BW91 350 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 RBKSQ9H477 322 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 FSCN3Q9NQT6 498 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 MMP26Q9NRE1 261 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 YAE1D1Q9NRH1 226 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF586Q9NXT0 402 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 MTFP1Q9UDX5 166 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TRAV8-7A0A075B6U6 113 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CENPVL1A0A0U1RR11 272 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 A0A1W2PRD5 423 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 A0A1W2PRF3 423 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 A0A1W2PRM7 423 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TLCD2A6NGC4 264 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CRYM-AS1A6NIL9 109 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 C4orf47A7E2U8 309 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ARPC3O15145 178 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SOCS1O15524 211 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TNFSF13O75888 250 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TIAF1O95411 115 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 FGF9P31371 208 aaPredicted RBP3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LPAR6P43657 344 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 GPM6AP51674 278 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 EFNB2P52799 333 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 SLC35B1P78383 322 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 PAX2Q02962 417 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF85Q03923 595 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ARL16Q0P5N6 197 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CEACAM21Q3KPI0 293 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNF718Q3SXZ3 478 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 CA13Q8N1Q1 262 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 LFNGQ8NES3 379 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 OR4C5Q8NGB2 326 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 ZNRF4Q8WWF5 429 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 MS4A10Q96PG2 267 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TMEM204Q9BSN7 226 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 TXNIPQ9H3M7 391 aa3.16□□□□□ -1.9
PCDH11X-208ENST00000504220 KCNIP2Q9NS61 270 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms