RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 HSD17B6O14756 317 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 ARPC1BO15143 372 aaKnown RBP7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 ARG1P05089 322 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 AKR1C4P17516 323 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 BTCP35070 178 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 PAX2Q02962 417 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 PAX8Q06710 450 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 GNMTQ14749 295 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 C4orf46Q504U0 113 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 GPR157Q5UAW9 335 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 FAM71F2Q6NXP2 309 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 ZNF66Q6ZN08 573 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 SLC25A48Q6ZT89 311 aaKnown RBP7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 PNKDQ8N490 385 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 TCTEX1D1Q8N7M0 179 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 WFDC11Q8NEX6 87 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 OR11H6Q8NGC7 330 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 OR13C8Q8NGS7 320 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 CHAC2Q8WUX2 184 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 HSD17B10Q99714 261 aaKnown RBP7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 MARVELD1Q9BSK0 173 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 RSRP1Q9BUV0 290 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 SIRPDQ9H106 197 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 ALX4Q9H161 411 aaPredicted RBP7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 MMP28Q9H239 520 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 MMP26Q9NRE1 261 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 GPR132Q9UNW8 380 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 MALRD1Q5VYJ5 2156 aa7.53□□□□□ -1.2
ARHGEF28-206ENST00000504003 A0A096LNT2 108 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 ATG12O94817 140 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 GAPDHP04406 335 aaKnown RBP7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 COX7A1P24310 79 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 HTR1DP28221 377 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 KIR2DS2P43631 304 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 UBE2E1P51965 193 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 PIGPP57054 158 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 RAB25P57735 213 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 RND3P61587 244 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 SRPXP78539 464 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 BAMBIQ13145 260 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 MINOS1Q5TGZ0 78 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 CCDC144NLQ6NUI1 221 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 KCTD9Q7L273 389 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 SLC25A42Q86VD7 318 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 BVESQ8NE79 360 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 CD300LFQ8TDQ1 290 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 RTN4IP1Q8WWV3 396 aaPredicted RBP7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 MSI2Q96DH6 328 aaKnown RBP7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 AIFM2Q9BRQ8 373 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 FXYD6Q9H0Q3 95 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 SIRT7Q9NRC8 400 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 CCL28Q9NRJ3 127 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 SLC2A9Q9NRM0 540 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 RNF150Q9ULK6 438 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 PRELID3BQ9Y3B1 194 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 TBL2Q9Y4P3 447 aaKnown RBP7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 MINOS1-NBL1R4GNA1 71 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 NBPF19A0A087WUL8 3843 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 POLQO75417 2590 aa7.52□□□□□ -1.21
ARHGEF28-206ENST00000504003 OOSP1A8MZH6 123 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 SMAD7O15105 426 aaKnown RBP7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 MPPED1O15442 326 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 CREBL2O60519 120 aaPredicted RBP7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 MMP23AO75900 390 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 IFNA2P01563 188 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 IGHV3-7P01780 117 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 APOA2P02652 100 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 IL5P05113 134 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 OR4E1P0C645 316 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 IGHV4-31P0DP07 118 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 RRASP10301 218 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 HNF1AP20823 631 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 VAMP1P23763 118 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 GNRHRP30968 328 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 THBS3P49746 956 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 EIF2B2P49770 351 aaKnown RBP7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 MECP2P51608 486 aaKnown RBP7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 DHODHQ02127 395 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 HLA-DRB5Q30154 266 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 MIDNQ504T8 468 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 PHLDA2Q53GA4 152 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 CT45A1Q5HYN5 189 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 ZNF818PQ6ZRF7 136 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 TGIF2LXQ8IUE1 241 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 C11orf42Q8N5U0 333 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 DRAM1Q8N682 238 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 Q8N7P7 452 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 ZNF439Q8NDP4 499 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 CT45A3Q8NHU0 189 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 COQ8AQ8NI60 647 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 LEAP2Q969E1 77 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 LHX4Q969G2 390 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 RPEQ96AT9 228 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 UPRTQ96BW1 309 aa7.51□□□□□ -1.21
ARHGEF28-206ENST00000504003 ABHD14BQ96IU4 210 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms