RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 KLRD1Q13241 179 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 ZNF273Q14593 569 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 SLC9A3R2Q15599 337 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 Q8N7P7 452 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 IL1F10Q8WWZ1 152 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 JMJD8Q96S16 334 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 CHIAQ9BZP6 476 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 SLC5A7Q9GZV3 580 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 NAA60Q9H7X0 242 aa13.2□□□□□ -0.3
LMNA-217ENST00000498722 SOX21Q9Y651 276 aaPredicted RBP13.2□□□□□ -0.3
LMNA-217ENST00000498722 hADV38S2A0JD32 116 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 DBX1A6NMT0 343 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 GZMHP20718 246 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 GLIPR1P48060 266 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
LMNA-217ENST00000498722 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 PRR18Q8N4B5 295 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 OR2T35Q8NGX2 323 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 SECTM1Q8WVN6 248 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 RTN4IP1Q8WWV3 396 aaPredicted RBP13.19□□□□□ -0.3
LMNA-217ENST00000498722 ZDHHC16Q969W1 377 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 RAB18Q9NP72 206 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 SLC2A9Q9NRM0 540 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 OR6C3Q9NZP0 311 aa13.19□□□□□ -0.3
LMNA-217ENST00000498722 TRAV39A0A0B4J263 110 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 MDFIC2A0A1B0GVS7 189 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 ODAMA1E959 279 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 C12orf77C9JDV5 145 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 SPINT2O43291 252 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 LUMP51884 338 aaPredicted RBP13.18□□□□□ -0.3
LMNA-217ENST00000498722 NKX2-5P52952 324 aaPredicted RBP13.18□□□□□ -0.3
LMNA-217ENST00000498722 P2RX3P56373 397 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 BPIFB3P59826 476 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
LMNA-217ENST00000498722 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
LMNA-217ENST00000498722 C2orf68Q2NKX9 166 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 GSG1LQ6UXU4 331 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 C1orf122Q6ZSJ8 110 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 OR10V1Q8NGI7 309 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 MRGPRDQ8TDS7 321 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 ZNF714Q96N38 554 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 PDCD10Q9BUL8 212 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 TOLLIPQ9H0E2 274 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 PIPOXQ9P0Z9 390 aa13.18□□□□□ -0.3
LMNA-217ENST00000498722 RNASEK-C17orf49H0YIS7 233 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 SMLR1H3BR10 107 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 VENTXO95231 258 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 SIX6O95475 246 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 HBZP02008 142 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 PRTN3P24158 256 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 GNRHRP30968 328 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 H2BFSP57053 126 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 HILS1P60008 231 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 FGL1Q08830 312 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 PHLDA2Q53GA4 152 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 OR13A1Q8NGR1 328 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 FAM216AQ8WUB2 273 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 AKR1E2Q96JD6 320 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 DUX5Q96PT3 197 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 RDH8Q9NYR8 311 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 OR1A1Q9P1Q5 309 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 FAM96BQ9Y3D0 163 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 LINC00312Q9Y6C7 94 aa13.17□□□□□ -0.3
LMNA-217ENST00000498722 FBN1P35555 2871 aaKnown RBP13.17□□□□□ -0.3
LMNA-217ENST00000498722 TRGV10A0A0A0MS01 117 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 PIGBOS1A0A0B4J2F0 54 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 MPPED1O15442 326 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 B3GALNT1O75752 331 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 COX7A1P24310 79 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 CEACAM6P40199 344 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 ERVFRD-1P60508 538 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 SRPXP78539 464 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 HTD2P86397 168 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 CYCSP99999 105 aaKnown RBP13.16□□□□□ -0.3
LMNA-217ENST00000498722 DEFB112Q30KQ8 113 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 LY6G6FQ5SQ64 297 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 PNKDQ8N490 385 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 OR1L1Q8NH94 360 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 ARL11Q969Q4 196 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 ZNF48Q96MX3 618 aaPredicted RBP13.16□□□□□ -0.3
LMNA-217ENST00000498722 COMMD9Q9P000 198 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 RBM7Q9Y580 266 aaKnown RBP13.16□□□□□ -0.3
LMNA-217ENST00000498722 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
LMNA-217ENST00000498722 IGKV1D-13A0A0B4J2D9 117 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 C5orf51A6NDU8 294 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 TRIM77I1YAP6 450 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 NPFFO15130 113 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 IGKV1-13P0DP09 117 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 ANKRD55Q3KP44 614 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 ZNF818PQ6ZRF7 136 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 BVESQ8NE79 360 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 MDFIQ99750 246 aa13.15□□□□□ -0.3
LMNA-217ENST00000498722 HEXA-AS1Q9H8Q6 139 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms