RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 H0YJW9 148 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 OVOL1O14753 267 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 CD37P11049 281 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 RPS25P62851 125 aaKnown RBP11.26□□□□□ -0.61
HDLBP-247ENST00000498595 GNB1P62873 340 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 CX3CL1P78423 397 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 IRF3Q14653 427 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 ACTBL2Q562R1 376 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 GLDNQ6ZMI3 551 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-247ENST00000498595 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 OR5AN1Q8NGI8 311 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 ARHGAP5-AS1Q96IT6 56 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-247ENST00000498595 ACOT13Q9NPJ3 140 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 OR1A1Q9P1Q5 309 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 SCOCQ9UIL1 159 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 U3KQK5 164 aa11.26□□□□□ -0.61
HDLBP-247ENST00000498595 LINC01619G3V211 115 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
HDLBP-247ENST00000498595 SAP30O75446 220 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 SPDEFO95238 335 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 TFAP2AP05549 437 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 SCTP09683 121 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 CD3GP09693 182 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 SERPINB10P48595 397 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-247ENST00000498595 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
HDLBP-247ENST00000498595 CBX3Q13185 183 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 UNQ5815/PRO19632Q6UWF5 114 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 PRSS48Q7RTY5 328 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 PTX4Q96A99 478 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 MGLLQ99685 303 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 PECRQ9BY49 303 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 PARP12Q9H0J9 701 aaKnown RBP11.25□□□□□ -0.61
HDLBP-247ENST00000498595 DUSP21Q9H596 190 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 Q9N2K0 584 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 LSM4Q9Y4Z0 139 aaKnown RBP11.25□□□□□ -0.61
HDLBP-247ENST00000498595 V9GY05 133 aa11.25□□□□□ -0.61
HDLBP-247ENST00000498595 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 PDCD5O14737 125 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
HDLBP-247ENST00000498595 GADD45AP24522 165 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 CLDN12P56749 244 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 NDPQ00604 133 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-247ENST00000498595 PSG5Q15238 335 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 C2orf76Q3KRA6 126 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 CD200R1LQ6Q8B3 271 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 ZNF562Q6V9R5 426 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 DRAXINQ8NBI3 349 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-247ENST00000498595 DCUN1D4Q92564 292 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 FLYWCH2Q96CP2 140 aaKnown RBP11.24□□□□□ -0.61
HDLBP-247ENST00000498595 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-247ENST00000498595 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 SMAD5-AS1Q9Y6J3 95 aa11.24□□□□□ -0.61
HDLBP-247ENST00000498595 FCN1O00602 326 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 ARPC1BO15143 372 aaKnown RBP11.23□□□□□ -0.61
HDLBP-247ENST00000498595 CNIH1O95406 144 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 MYL9P24844 172 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 HSPA13P48723 471 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 TPPP2P59282 170 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-247ENST00000498595 OR4A4PQ8NGN8 299 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 OR10J5Q8NHC4 309 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 ARPC1AQ92747 370 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 RAB3CQ96E17 227 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 GFI1Q99684 422 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 CENPOQ9BU64 300 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 TOLLIPQ9H0E2 274 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 FBXO7Q9Y3I1 522 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 RBM7Q9Y580 266 aaKnown RBP11.23□□□□□ -0.61
HDLBP-247ENST00000498595 NUBP2Q9Y5Y2 271 aa11.23□□□□□ -0.61
HDLBP-247ENST00000498595 M0R1X1 148 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 BET1O15155 118 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 FABP7O15540 132 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 SOX15O60248 233 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 CA2P00918 260 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 CRHBPP24387 322 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 TMEM50BP56557 158 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 PITPNAQ00169 270 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 FABP5Q01469 135 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 C19orf54Q5BKX5 351 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 HES5Q5TA89 166 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 ASPHD1Q5U4P2 390 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 OR6Q1Q8NGQ2 317 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 GRPEL2Q8TAA5 225 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 CASTOR1Q8WTX7 329 aa11.22□□□□□ -0.61
HDLBP-247ENST00000498595 NRG4Q8WWG1 115 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms