RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 SLC35E3Q7Z769 313 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 C11orf53Q8IXP5 236 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 ZNF610Q8N9Z0 462 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 GPR61Q9BZJ8 451 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 KLF13Q9Y2Y9 288 aaPredicted RBP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 KALRNO60229 2985 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TRAV1-1A0A0B4J248 108 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 MAP1LC3B2A6NCE7 125 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 C21orf140B9A014 251 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 ZG16O60844 167 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 IGHV3-13P01766 116 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 IGHV3-7P01780 117 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 IGHV2-70P01814 119 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TFF3Q07654 80 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TMEM164Q5U3C3 297 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 WDR25Q64LD2 544 aaPredicted RBP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TAF15Q92804 592 aaKnown RBP eCLIP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 COQ2Q96H96 371 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 MAP1LC3BQ9GZQ8 125 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 MSL2Q9HCI7 577 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 OBP2BQ9NPH6 170 aa13.7□□□□□ -0.22
PCBP4-216ENST00000497390 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 CISD1Q9NZ45 108 aaKnown RBP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TET2Q6N021 2002 aaPredicted RBP13.7□□□□□ -0.22
PCBP4-216ENST00000497390 TTC28Q96AY4 2481 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 ODAMA1E959 279 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 CD81P60033 236 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 TNFRSF9Q07011 255 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 HES3Q5TGS1 186 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 DEFB123Q8N688 67 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 NECAP1Q8NC96 275 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 KLF14Q8TD94 323 aaPredicted RBP13.69□□□□□ -0.22
PCBP4-216ENST00000497390 TOLLIPQ9H0E2 274 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 OR51M1Q9H341 326 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 WIPI2Q9Y4P8 454 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 TRGC1P0CF51 173 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 MBD3L1Q8WWY6 194 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
PCBP4-216ENST00000497390 CEP250Q9BV73 2442 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 OR5H1A6NKK0 313 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 LINC00473A8K010 186 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 SH2D1BO14796 132 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 PTBP3O95758 552 aaKnown RBP13.68□□□□□ -0.22
PCBP4-216ENST00000497390 HBZP02008 142 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 CDX1P47902 265 aaPredicted RBP13.68□□□□□ -0.22
PCBP4-216ENST00000497390 RTP5Q14D33 572 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 DPPA3Q6W0C5 159 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 HIPK2Q9H2X6 1198 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 C9orf152Q5JTZ5 239 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 VWA1Q6PCB0 445 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 CNEP1R1Q8N9A8 125 aa13.68□□□□□ -0.22
PCBP4-216ENST00000497390 BSNQ9UPA5 3926 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 ZNF737O75373 536 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 GABRA2P47869 451 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 TMEM41BQ5BJD5 291 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 UTF1Q5T230 341 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 TMEM14EPQ6UXP3 125 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 OR10D4PQ8NGN7 298 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
PCBP4-216ENST00000497390 LHX4Q969G2 390 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 RPUSD4Q96CM3 377 aaKnown RBP13.67□□□□□ -0.22
PCBP4-216ENST00000497390 FAM210BQ96KR6 192 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 POLDIP2Q9Y2S7 368 aa13.67□□□□□ -0.22
PCBP4-216ENST00000497390 ST8SIA5O15466 376 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 CD46P15529 392 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 FABP6P51161 128 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 UBE2NP61088 152 aaKnown RBP13.66□□□□□ -0.22
PCBP4-216ENST00000497390 HBG1P69891 147 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 HBG2P69892 147 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 EIF4EBP1Q13541 118 aaPredicted RBP13.66□□□□□ -0.22
PCBP4-216ENST00000497390 MOB1BQ7L9L4 216 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 ZNF645Q8N7E2 425 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 OR13A1Q8NGR1 328 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 TRIB1Q96RU8 372 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 PSMG3Q9BT73 122 aaPredicted RBP13.66□□□□□ -0.22
PCBP4-216ENST00000497390 PMS2P5A8MQ11 134 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 P0C879 139 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 IL2RGP31785 369 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 SOX8P57073 446 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 GCSAMLQ5JQS6 135 aa13.66□□□□□ -0.22
PCBP4-216ENST00000497390 WNT2P09544 360 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 SP9P0CG40 484 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 FOXF2Q12947 444 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 ADIRFQ15847 76 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 ALKBH2Q6NS38 261 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 GALMQ96C23 342 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 ELOVL1Q9BW60 279 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 IQCF6A8MYZ5 107 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 PHOX2AO14813 284 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 ZNF883P0CG24 379 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 GABRA6Q16445 453 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 SNIP1Q8TAD8 396 aaKnown RBP13.65□□□□□ -0.22
PCBP4-216ENST00000497390 SNX22Q96L94 193 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 TCEAL7Q9BRU2 100 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 ZDHHC11Q9H8X9 412 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 HES4Q9HCC6 221 aa13.65□□□□□ -0.22
PCBP4-216ENST00000497390 SIRT7Q9NRC8 400 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms