RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SHISA3A0PJX4 238 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 L7N2F9 121 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 LY86O95711 162 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MOSP00540 346 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 TFF1P04155 84 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 CD3DP04234 171 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 UBE2MP61081 183 aaKnown RBP7.08□□□□□ -1.28
U2AF1-212ENST00000496462 VAMP2P63027 116 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 AANATQ16613 207 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 KHDC1LQ5JSQ8 128 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 PLAC9Q5JTB6 97 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 PDPNQ86YL7 162 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SPAG16Q8N0X2 631 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 LY6G5BQ8NDX9 201 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 OR4F5Q8NH21 305 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 TMUB1Q9BVT8 246 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF355PQ9NSJ1 428 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 KCNK7Q9Y2U2 307 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 FCGR3BO75015 233 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MED6O75586 246 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 H2AFB2P0C5Z0 115 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 CD34P28906 385 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 CCDC190Q86UF4 302 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 MINDY2Q8NBR6 621 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 CASTOR1Q8WTX7 329 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 GFI1Q99684 422 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 GSX1Q9H4S2 264 aaPredicted RBP7.08□□□□□ -1.28
U2AF1-212ENST00000496462 NUBP2Q9Y5Y2 271 aa7.08□□□□□ -1.28
U2AF1-212ENST00000496462 SNRNP70P08621 437 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 VDAC1P21796 283 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 AADACP22760 399 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 SNCAP37840 140 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 LY6EQ16553 131 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 PHLDA2Q53GA4 152 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF626Q68DY1 528 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM65Q6PI78 240 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 HARBI1Q96MB7 349 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 PAIP2BQ9ULR5 123 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 RBMX2Q9Y388 322 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 NIPBLQ6KC79 2804 aaeCLIP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 TRBV6-7A0A0A0MS04 114 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 A0A1W2PPE3 182 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 IL7P13232 177 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 CD1BP29016 333 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 S100A7P31151 101 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 BRD3OSQ6XYD6 125 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 ZNF841Q6ZN19 808 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 ZDHHC22Q8N966 263 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 OR11H6Q8NGC7 330 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 C1orf147Q96MC9 270 aaPredicted RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM56Q96MV1 263 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 NXF2Q9GZY0 626 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 BEX1Q9HBH7 125 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 ZFHX3Q15911 3703 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 FAM25EA8MYX2 175 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 NPIPB11E5RHQ5 1161 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 BUB1B-PAK6H3BSN5 160 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 NQO2P16083 231 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 DNM1P46Q6ZS02 220 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 RTN4IP1Q8WWV3 396 aaPredicted RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM158Q8WZ71 300 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 RBM38Q9H0Z9 239 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 MALRD1Q5VYJ5 2156 aa7.07□□□□□ -1.28
U2AF1-212ENST00000496462 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
U2AF1-212ENST00000496462 C5orf51A6NDU8 294 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 IFNA17P01571 189 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 CTSDP07339 412 aaPredicted RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 C4BPBP20851 252 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 ANOS1P23352 680 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 UCP3P55916 312 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 TMEM255AQ5JRV8 349 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 MMD2Q8IY49 270 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 H1FOOQ8IZA3 346 aaPredicted RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 GVQW1Q8N7I0 195 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 OR51S1Q8NGJ8 323 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 OR1S1Q8NH92 325 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 ABHD14BQ96IU4 210 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 SIRPDQ9H106 197 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 THYN1Q9P016 225 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 MOB4Q9Y3A3 225 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 DYSFO75923 2080 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 HPRT1P00492 218 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 HLA-DQB1P01920 261 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 REG1BP48304 166 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 KLRD1Q13241 179 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 IGSF11Q5DX21 431 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 SLC25A48Q6ZT89 311 aaKnown RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 SLC35G3Q8N808 338 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 OSR1Q8TAX0 266 aaPredicted RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 KLK11Q9UBX7 282 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 KIAA1324LA8MWY0 1029 aaPredicted RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 H3BUX3 64 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 CRYZL1O95825 349 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 DEFA4P12838 97 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 PIGPP57054 158 aa7.06□□□□□ -1.28
U2AF1-212ENST00000496462 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
U2AF1-212ENST00000496462 SIGIRRQ6IA17 410 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms