RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 OR52L2PQ8NGH6 319 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 DYNC2LI1Q8TCX1 351 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 CHPT1Q8WUD6 406 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 AP3S1Q92572 193 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 S100A16Q96FQ6 103 aaKnown RBP11.36□□□□□ -0.59
CXCL12-208ENST00000496375 AUNIPQ9H7T9 357 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 CCDC59Q9P031 241 aaKnown RBP11.36□□□□□ -0.59
CXCL12-208ENST00000496375 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 A3GALT2U3KPV4 340 aa11.36□□□□□ -0.59
CXCL12-208ENST00000496375 A0A075B6Q4 140 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 HSD17B6O14756 317 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 FABP7O15540 132 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 FGF16O43320 207 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 TXNL1O43396 289 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 SCTP09683 121 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 ZBTB25P24278 435 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 IL3RAP26951 378 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 PPP1CCP36873 323 aaKnown RBP11.35□□□□□ -0.59
CXCL12-208ENST00000496375 THBS3P49746 956 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 RPL23AP62750 156 aaKnown RBP11.35□□□□□ -0.59
CXCL12-208ENST00000496375 ARFRP1Q13795 201 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 DEFB121Q5J5C9 76 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 FAM71F2Q6NXP2 309 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 ODF3L1Q8IXM7 274 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 OR10V1Q8NGI7 309 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 SETD6Q8TBK2 473 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 ABHD14AQ9BUJ0 271 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 WDR12Q9GZL7 423 aaKnown RBP11.35□□□□□ -0.59
CXCL12-208ENST00000496375 GHITMQ9H3K2 345 aa11.35□□□□□ -0.59
CXCL12-208ENST00000496375 RYR3Q15413 4870 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 TRAV18A0A075B6X5 111 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 TRBV6-7A0A0A0MS04 114 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 NUDT19A8MXV4 375 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 LANCL1O43813 399 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 TPPPO94811 219 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 EIF4EP06730 217 aaKnown RBP11.34□□□□□ -0.59
CXCL12-208ENST00000496375 TALDO1P37837 337 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 REG1BP48304 166 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 GNG2P59768 71 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 MZT2AQ6P582 158 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 MOB3BQ86TA1 216 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 NUDCD2Q8WVJ2 157 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
CXCL12-208ENST00000496375 IL1F10Q8WWZ1 152 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 EDARADDQ8WWZ3 215 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 DPF1Q92782 380 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 IFI27L2Q9H2X8 130 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 COMMD3Q9UBI1 195 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 ANAPC10Q9UM13 185 aa11.34□□□□□ -0.59
CXCL12-208ENST00000496375 IGKV1D-8A0A087WSZ0 117 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 IGHV3-72A0A0B4J1Y9 119 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 IGHG2P01859 326 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 GAPDHP04406 335 aaKnown RBP11.33□□□□□ -0.6
CXCL12-208ENST00000496375 GSTT2P0CG29 244 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 GSTT2BP0CG30 244 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 SOX6P35712 828 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 TAS2R20P59543 309 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 SLC35B1P78383 322 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 EBI3Q14213 229 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 VAX1Q5SQQ9 334 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 C11orf87Q6NUJ2 197 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF833PQ6ZTB9 187 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 FOXRED2Q8IWF2 684 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 IZUMO1Q8IYV9 350 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 OR2AK2Q8NG84 335 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 ZFP57Q9NU63 452 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 OR1A1Q9P1Q5 309 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 SLC23A1Q9UHI7 598 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
CXCL12-208ENST00000496375 ADAM30Q9UKF2 790 aa11.33□□□□□ -0.6
CXCL12-208ENST00000496375 IGHV1-3A0A0C4DH29 117 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 LINC01548A6NM66 108 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 HLA-DQB1P01920 261 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 CTXN2P0C2S0 81 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 ELK1P19419 428 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 MYCNOSP40205 109 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 CBX5P45973 191 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 IGSF11Q5DX21 431 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 TMEM69Q5SWH9 247 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 HOGA1Q86XE5 327 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 STPG2Q8N412 459 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 KLHL30-AS1Q8NEE0 82 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-208ENST00000496375 ZNF251Q9BRH9 671 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 PARP12Q9H0J9 701 aaKnown RBP11.32□□□□□ -0.6
CXCL12-208ENST00000496375 PIPOXQ9P0Z9 390 aa11.32□□□□□ -0.6
CXCL12-208ENST00000496375 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
CXCL12-208ENST00000496375 HPGDSO60760 199 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 SLC6A1P30531 599 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 CEACAM6P40199 344 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
CXCL12-208ENST00000496375 TGIF2LXQ8IUE1 241 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms