RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 METTL21EPA6NDL7 271 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 RAB27BO00194 218 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 ATP6V0E1O15342 81 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 FABP7O15540 132 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 FCGR3AP08637 254 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 CNTFRP26992 372 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 PLA2G7Q13093 441 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 ARL6IP1Q15041 203 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
HDAC4-213ENST00000496347 RNF5Q99942 180 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 PARP11Q9NR21 331 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 STUB1Q9UNE7 303 aa12.31□□□□□ -0.44
HDAC4-213ENST00000496347 H7C2Y5 167 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 CCL24O00175 119 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 SPDEFO95238 335 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 CRIP2P52943 208 aaPredicted RBP12.3□□□□□ -0.44
HDAC4-213ENST00000496347 MOGAT2Q3SYC2 334 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 LIN54Q6MZP7 749 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 ZNF773Q6PK81 442 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 NR2C2APQ86WQ0 139 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 RAX2Q96IS3 184 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 RITA1Q96K30 269 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 CENPOQ9BU64 300 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 RDH8Q9NYR8 311 aa12.3□□□□□ -0.44
HDAC4-213ENST00000496347 TRAV41A0A0B4J266 112 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 NOTOA8MTQ0 251 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 RRHO14718 337 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 SCGNO76038 276 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 APOA2P02652 100 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 GSTP1P09211 210 aaKnown RBP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 GNB3P16520 340 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 FHL3Q13643 280 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 ZNF660Q6AZW8 331 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 GLDNQ6ZMI3 551 aaPredicted RBP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 Q6ZS49 121 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 LCNL1Q6ZST4 164 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 TPRA1Q86W33 373 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 PDPNQ86YL7 162 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 OR10J5Q8NHC4 309 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
HDAC4-213ENST00000496347 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
HDAC4-213ENST00000496347 TRBV6-7A0A0A0MS04 114 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 A0A0B4J203 849 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 IGLV1-40P01703 118 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 TFAP2AP05549 437 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
HDAC4-213ENST00000496347 NDPQ00604 133 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 PLGLAQ15195 96 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 DEFB136Q30KP8 78 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 TMEM65Q6PI78 240 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 UBE2E2Q96LR5 201 aa12.28□□□□□ -0.44
HDAC4-213ENST00000496347 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
HDAC4-213ENST00000496347 ZMAT5Q9UDW3 170 aaKnown RBP12.28□□□□□ -0.44
HDAC4-213ENST00000496347 A0A075B6Q4 140 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 G3V318 75 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 BET1O15155 118 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 DTYMKP23919 212 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 RAB25P57735 213 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 RUNX1Q01196 453 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 ARFRP1Q13795 201 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 KCTD21Q4G0X4 260 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 C19orf54Q5BKX5 351 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 ZNF383Q8NA42 475 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 MINDY2Q8NBR6 621 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 OR5M8Q8NGP6 311 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 DUX3Q96PT4 197 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 OR2D2Q9H210 308 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 FBXL15Q9H469 300 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 SSR3Q9UNL2 185 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 FOXA2Q9Y261 457 aaPredicted RBP12.27□□□□□ -0.45
HDAC4-213ENST00000496347 WSB1Q9Y6I7 421 aa12.27□□□□□ -0.45
HDAC4-213ENST00000496347 M0R1X1 148 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 PROP1O75360 226 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 HOXD3P31249 432 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-213ENST00000496347 TALDO1P37837 337 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 SCAND1P57086 179 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 KRTAP10-11P60412 298 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 CX3CL1P78423 397 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 DCTN2Q13561 401 aaKnown RBP12.26□□□□□ -0.45
HDAC4-213ENST00000496347 ECSCRQ19T08 205 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 IGSF11Q5DX21 431 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 PYHIN1Q6K0P9 492 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 SFXN4Q6P4A7 337 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
HDAC4-213ENST00000496347 GINS4Q9BRT9 223 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 RNF150Q9ULK6 438 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 GAB2Q9UQC2 676 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 VSIG4Q9Y279 399 aa12.26□□□□□ -0.45
HDAC4-213ENST00000496347 SMIM30A4D0T7 59 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 K7EIL1 84 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 OR8U8P0C7N1 319 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 GSTT2P0CG29 244 aa12.25□□□□□ -0.45
HDAC4-213ENST00000496347 GSTT2BP0CG30 244 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms