RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ZNF221Q9UK13 617 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 KCNK7Q9Y2U2 307 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 WASHC3Q9Y3C0 194 aa18.96■□□□□ 0.63
HLA-C-209ENST00000495835 CRIP2P52943 208 aaPredicted RBP18.95■□□□□ 0.62
HLA-C-209ENST00000495835 OR10A3P58181 314 aa18.95■□□□□ 0.62
HLA-C-209ENST00000495835 SRSF7Q16629 238 aaKnown RBP eCLIP18.95■□□□□ 0.62
HLA-C-209ENST00000495835 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.95■□□□□ 0.62
HLA-C-209ENST00000495835 C4orf3Q8WVX3 66 aa18.95■□□□□ 0.62
HLA-C-209ENST00000495835 RBMXL1Q96E39 390 aaKnown RBP18.95■□□□□ 0.62
HLA-C-209ENST00000495835 RAX2Q96IS3 184 aa18.95■□□□□ 0.62
HLA-C-209ENST00000495835 PARP12Q9H0J9 701 aaKnown RBP18.95■□□□□ 0.62
HLA-C-209ENST00000495835 GAB2Q9UQC2 676 aa18.95■□□□□ 0.62
HLA-C-209ENST00000495835 IGKV1-6A0A0C4DH72 117 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 RAB27BO00194 218 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 RRHO14718 337 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 IGLV1-40P01703 118 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 GSTP1P09211 210 aaKnown RBP18.94■□□□□ 0.62
HLA-C-209ENST00000495835 C22orf42Q6IC83 251 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 TMEM65Q6PI78 240 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 TPRA1Q86W33 373 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 UBE2E2Q96LR5 201 aa18.94■□□□□ 0.62
HLA-C-209ENST00000495835 TRAV41A0A0B4J266 112 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 H7C2Y5 167 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 MFNGO00587 321 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 ATP6V0E1O15342 81 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 FABP7O15540 132 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 PROP1O75360 226 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 FCGR3AP08637 254 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 PLA2G7Q13093 441 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 TCTEX1D1Q8N7M0 179 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 MINDY2Q8NBR6 621 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 CABLES2Q9BTV7 478 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 RDH8Q9NYR8 311 aa18.93■□□□□ 0.62
HLA-C-209ENST00000495835 HIST1H1DP16402 221 aaKnown RBP18.92■□□□□ 0.62
HLA-C-209ENST00000495835 RUNX1Q01196 453 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 MOGAT2Q3SYC2 334 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 Q6ZS49 121 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 LCNL1Q6ZST4 164 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 OR5M8Q8NGP6 311 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.92■□□□□ 0.62
HLA-C-209ENST00000495835 PARP11Q9NR21 331 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 TXNL4BQ9NX01 149 aaKnown RBP18.92■□□□□ 0.62
HLA-C-209ENST00000495835 STUB1Q9UNE7 303 aa18.92■□□□□ 0.62
HLA-C-209ENST00000495835 TRBV6-7A0A0A0MS04 114 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 NOTOA8MTQ0 251 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 SPDEFO95238 335 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 TFAP2AP05549 437 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 PSMB9P28065 219 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 KRTAP10-11P60412 298 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 TAGLNQ01995 201 aaKnown RBP18.91■□□□□ 0.62
HLA-C-209ENST00000495835 TMEM267Q0VDI3 215 aaPredicted RBP18.91■□□□□ 0.62
HLA-C-209ENST00000495835 GLDNQ6ZMI3 551 aaPredicted RBP18.91■□□□□ 0.62
HLA-C-209ENST00000495835 PDPNQ86YL7 162 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 OR10J5Q8NHC4 309 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 TSNAXQ99598 290 aaKnown RBP18.91■□□□□ 0.62
HLA-C-209ENST00000495835 RNF150Q9ULK6 438 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 WSB1Q9Y6I7 421 aa18.91■□□□□ 0.62
HLA-C-209ENST00000495835 G3V318 75 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 APOA2P02652 100 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 FHL3Q13643 280 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 PLGLAQ15195 96 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 ZNF491Q8N8L2 437 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 FBXL15Q9H469 300 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 SSR3Q9UNL2 185 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 VSIG4Q9Y279 399 aa18.9■□□□□ 0.62
HLA-C-209ENST00000495835 K7EIL1 84 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 SCGNO76038 276 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 GNB3P16520 340 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 TALDO1P37837 337 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 RAB9AP51151 201 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 CX3CL1P78423 397 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 DCTN2Q13561 401 aaKnown RBP18.89■□□□□ 0.61
HLA-C-209ENST00000495835 KIAA0141Q14154 515 aaPredicted RBP18.89■□□□□ 0.61
HLA-C-209ENST00000495835 C19orf54Q5BKX5 351 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 ZNF562Q6V9R5 426 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 NR2C2APQ86WQ0 139 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 NUBP2Q9Y5Y2 271 aa18.89■□□□□ 0.61
HLA-C-209ENST00000495835 BET1O15155 118 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 RAMP3O60896 148 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 GSTT2P0CG29 244 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 GSTT2BP0CG30 244 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 PSG5Q15238 335 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 AKIRIN2Q53H80 203 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 PYHIN1Q6K0P9 492 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 ZNF773Q6PK81 442 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 ZNF383Q8NA42 475 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 DUX3Q96PT4 197 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 ATG5Q9H1Y0 275 aa18.88■□□□□ 0.61
HLA-C-209ENST00000495835 I3L521 148 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 DTYMKP23919 212 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 HOXD3P31249 432 aaPredicted RBP18.87■□□□□ 0.61
HLA-C-209ENST00000495835 LGALS7P47929 136 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 ARFRP1Q13795 201 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 DEFB136Q30KP8 78 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 IGSF11Q5DX21 431 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 C9orf66Q5T8R8 295 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 DRAXINQ8NBI3 349 aaPredicted RBP18.87■□□□□ 0.61
HLA-C-209ENST00000495835 OR11H1Q8NG94 326 aa18.87■□□□□ 0.61
HLA-C-209ENST00000495835 FLYWCH2Q96CP2 140 aaKnown RBP18.87■□□□□ 0.61
HLA-C-209ENST00000495835 KLK15Q9H2R5 256 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms