RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 ARFGEF1Q9Y6D6 1849 aa3.03□□□□□ -1.93
CCDC39-207ENST00000495817 LRRN3E7EW58 273 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 GOLGA6L19H0YKK7 550 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 TMEM250H0YL14 139 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 H3BQ85 93 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 CYTH3O43739 400 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 UGT2B11O75310 529 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 FABP1P07148 127 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 SPNP16150 400 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 AKR1C4P17516 323 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 HSD11B1P28845 292 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 KDELR2P33947 212 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 RHOAP61586 193 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 REEP5Q00765 189 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 PDK2Q15119 407 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 ALX1Q15699 326 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 UAP1Q16222 522 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-207ENST00000495817 CLEC20AQ6ZU45 233 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 SLC13A5Q86YT5 568 aaPredicted RBP3.02□□□□□ -1.93
CCDC39-207ENST00000495817 TBC1D19Q8N5T2 526 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 GATD1Q8NB37 220 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 DTD1Q8TEA8 209 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 FXYD5Q96DB9 178 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 TMA16Q96EY4 203 aaKnown RBP3.02□□□□□ -1.93
CCDC39-207ENST00000495817 SHANK2-AS3Q9BTD1 123 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 PLA2G12AQ9BZM1 189 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 WDR54Q9H977 334 aa3.02□□□□□ -1.93
CCDC39-207ENST00000495817 KIF20BQ96Q89 1820 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 IGHV1-45A0A0A0MS14 117 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 TMEM213A2RRL7 107 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 POP7O75817 140 aaKnown RBP3.01□□□□□ -1.93
CCDC39-207ENST00000495817 LIMS3P0CW19 117 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 LIMS4P0CW20 117 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 PRPS1L1P21108 318 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 PSMD7P51665 324 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 AP3S2P59780 193 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 MARCH3Q86UD3 253 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 CLDN23Q96B33 292 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 MBOAT7Q96N66 472 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 EBPLQ9BY08 206 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 TAS2R7Q9NYW3 318 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 COMMD9Q9P000 198 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 POMPQ9Y244 141 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 ICOSQ9Y6W8 199 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 DLEC1Q9Y238 1755 aa3.01□□□□□ -1.93
CCDC39-207ENST00000495817 ADAMTSL1Q8N6G6 1762 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 SEC16AO15027 2179 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 NRXN2Q9P2S2 1712 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 TMEM114B3SHH9 223 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 C4orf51C9J302 202 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 PHYHO14832 338 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 DENRO43583 198 aaKnown RBP3□□□□□ -1.93
CCDC39-207ENST00000495817 ATF1P18846 271 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 CD34P28906 385 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 ALDH3A1P30838 453 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 COILP38432 576 aaPredicted RBP3□□□□□ -1.93
CCDC39-207ENST00000495817 CEBPGP53567 150 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 CXCR4P61073 352 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 MGAT3Q09327 533 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 TSPAN31Q12999 210 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 SPOPLQ6IQ16 392 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 OLIG3Q7RTU3 272 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 CALHM3Q86XJ0 350 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 CRLF3Q8IUI8 442 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 TMEM156Q8N614 296 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 OR5AK3PQ8NH89 298 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 DYNC2LI1Q8TCX1 351 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 RNASEH2CQ8TDP1 164 aaKnown RBP3□□□□□ -1.93
CCDC39-207ENST00000495817 DNAJB3Q8WWF6 145 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 PACRGQ96M98 296 aaPredicted RBP3□□□□□ -1.93
CCDC39-207ENST00000495817 ASCL3Q9NQ33 180 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 TAS2R9Q9NYW1 312 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 COL4A5P29400 1685 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 SCN7AQ01118 1682 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 ZNF831Q5JPB2 1677 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 SMG6Q86US8 1419 aaKnown RBP3□□□□□ -1.93
CCDC39-207ENST00000495817 FLT4P35916 1363 aa3□□□□□ -1.93
CCDC39-207ENST00000495817 SBF1O95248 1867 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 ANKRD31Q8N7Z5 1873 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 MRC1P22897 1456 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 ZNF729A6NN14 1252 aaPredicted RBP2.99□□□□□ -1.93
CCDC39-207ENST00000495817 SYNGR1O43759 233 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 IFNA14P01570 189 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 TRGV3P03979 118 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 RPS17P08708 135 aaKnown RBP2.99□□□□□ -1.93
CCDC39-207ENST00000495817 KRT7P08729 469 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 COX5BP10606 129 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 MAGEA2P43356 314 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 CAPZBP47756 277 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 S100A12P80511 92 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 Q6ZQT7 251 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 CPNE9Q8IYJ1 553 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 PRSS27Q9BQR3 290 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 DUSP21Q9H596 190 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 C1orf109Q9NX04 203 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 ZNF586Q9NXT0 402 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 R4GN34 69 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 MYH3P11055 1940 aa2.99□□□□□ -1.93
CCDC39-207ENST00000495817 AFDNP55196 1824 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms