RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 HERV-K104P61576 105 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 TSPAN5P62079 268 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 SRSF2Q01130 221 aaKnown RBP13.74□□□□□ -0.21
HDAC6-235ENST00000495515 HES1Q14469 280 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 PYDC2Q56P42 97 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 RNASE10Q5GAN6 216 aaKnown RBP13.74□□□□□ -0.21
HDAC6-235ENST00000495515 DHRS7BQ6IAN0 325 aaPredicted RBP13.74□□□□□ -0.21
HDAC6-235ENST00000495515 C16orf82Q7Z2V1 217 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 OR6F1Q8NGZ6 308 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 CFHR4Q92496 578 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 BORCS5Q969J3 196 aa13.74□□□□□ -0.21
HDAC6-235ENST00000495515 FAM181BA6NEQ2 426 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 J3QRK9 145 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 PPYP01298 95 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 SNRNP70P08621 437 aaKnown RBP13.73□□□□□ -0.21
HDAC6-235ENST00000495515 AADACP22760 399 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 DHRS11Q6UWP2 260 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 LINC00299Q6ZSB3 139 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 TMEM17Q86X19 198 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 TMEM229BQ8NBD8 167 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 OR2T10Q8NGZ9 312 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 MDFIQ99750 246 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 NABP2Q9BQ15 211 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF251Q9BRH9 671 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
HDAC6-235ENST00000495515 RBMX2Q9Y388 322 aaKnown RBP13.73□□□□□ -0.21
HDAC6-235ENST00000495515 V9GYH0 126 aa13.73□□□□□ -0.21
HDAC6-235ENST00000495515 IGHV3-72A0A0B4J1Y9 119 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 M0R1X1 148 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 OR2F2O95006 317 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 TMEM11P17152 192 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 CD24P25063 80 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 MC5RP33032 325 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 LSAMPQ13449 338 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-235ENST00000495515 NPFFR1Q9GZQ6 430 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 SDHAF2Q9NX18 166 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 PTTG2Q9NZH5 202 aa13.72□□□□□ -0.21
HDAC6-235ENST00000495515 RNF212BA8MTL3 300 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 M0QZK8 103 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 MOSP00540 346 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 APOA2P02652 100 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 CD3DP04234 171 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 CT45A6P0DMU7 189 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 CT45A5P0DMU8 189 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 CT45A7P0DMV0 189 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 FXYD4P59646 89 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
HDAC6-235ENST00000495515 EBI3Q14213 229 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 MEF2DQ14814 521 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 MSMO1Q15800 293 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 KRTAP24-1Q3LI83 254 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 TMEM219Q86XT9 240 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 Q8N402 240 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 ARRDC1Q8N5I2 433 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 ZBTB34Q8NCN2 500 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 SECTM1Q8WVN6 248 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 RBM14Q96PK6 669 aaKnown RBP13.71□□□□□ -0.21
HDAC6-235ENST00000495515 SLC25A33Q9BSK2 321 aa13.71□□□□□ -0.21
HDAC6-235ENST00000495515 THAP7Q9BT49 309 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-235ENST00000495515 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 M0QYG6 137 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 RAB3DO95716 219 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 CD74P04233 296 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 THBS3P49746 956 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 AP3S2P59780 193 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 ZNF45Q02386 682 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 CBX3Q13185 183 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 ZNF660Q6AZW8 331 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-235ENST00000495515 STEAP1BQ6NZ63 245 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 CCBE1Q6UXH8 406 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-235ENST00000495515 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-235ENST00000495515 OR8H1Q8NGG4 311 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 MOB3AQ96BX8 217 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
HDAC6-235ENST00000495515 SLC5A7Q9GZV3 580 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 C1RLQ9NZP8 487 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 DNHD1Q96M86 4753 aa13.7□□□□□ -0.22
HDAC6-235ENST00000495515 H7C2Y5 167 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 PROP1O75360 226 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 AKAIN1P0CW23 69 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 HKR1P10072 659 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 HNF4GQ14541 408 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 ZNF79Q15937 498 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 LPCAT3Q6P1A2 487 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 GDPD1Q8N9F7 314 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-235ENST00000495515 OR5AN1Q8NGI8 311 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 OR4C13Q8NGP0 309 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 OR4F5Q8NH21 305 aa13.69□□□□□ -0.22
HDAC6-235ENST00000495515 HSD17B10Q99714 261 aaKnown RBP13.69□□□□□ -0.22
HDAC6-235ENST00000495515 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms