RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 Q6ZS49 121 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 TOLLIPQ9H0E2 274 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 DCSTAMPQ9H295 470 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 RNF167Q9H6Y7 350 aa13.92□□□□□ -0.18
HDAC4-211ENST00000494800 ZNF230Q9UIE0 474 aaPredicted RBP13.92□□□□□ -0.18
HDAC4-211ENST00000494800 NUDT19A8MXV4 375 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 APOA2P02652 100 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 TFAP2AP05549 437 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 CLEC2LP0C7M8 214 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 CD33P20138 364 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 PLGLAQ15195 96 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 LIN54Q6MZP7 749 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 NPBQ8NG41 125 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 MAFIPQ8WZ33 124 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 RNF5Q99942 180 aa13.91□□□□□ -0.18
HDAC4-211ENST00000494800 A0A0A6YYH2 397 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 A6NJ64 397 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 LINC01548A6NM66 108 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 H0YJW9 148 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 IGF1P05019 195 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 CTXN2P0C2S0 81 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 OR8U9P0C7N5 309 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 RPL23AP62750 156 aaKnown RBP13.9□□□□□ -0.18
HDAC4-211ENST00000494800 CBX3Q13185 183 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 C5orf64Q2M2E5 130 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 CXorf66Q5JRM2 361 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-211ENST00000494800 GLDNQ6ZMI3 551 aaPredicted RBP13.9□□□□□ -0.18
HDAC4-211ENST00000494800 OR8U1Q8NH10 309 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 ST6GALNAC5Q9BVH7 336 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 DIABLOQ9NR28 239 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 ZNF580Q9UK33 172 aa13.9□□□□□ -0.18
HDAC4-211ENST00000494800 WNK1Q9H4A3 2382 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 TMEM235A6NFC5 223 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 M0R1X1 148 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 NDUFA3O95167 84 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 FOXE3Q13461 319 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 PDPNQ86YL7 162 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
HDAC4-211ENST00000494800 RITA1Q96K30 269 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 TSNAXQ99598 290 aaKnown RBP13.89□□□□□ -0.19
HDAC4-211ENST00000494800 GAB2Q9UQC2 676 aa13.89□□□□□ -0.19
HDAC4-211ENST00000494800 ELANEP08246 267 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 CNTFRP26992 372 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 TAGLNQ01995 201 aaKnown RBP13.88□□□□□ -0.19
HDAC4-211ENST00000494800 ZNF260Q3ZCT1 412 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
HDAC4-211ENST00000494800 YIPF6Q96EC8 236 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 OR51J1Q9H342 316 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 PARP11Q9NR21 331 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 SPATA2Q9UM82 520 aa13.88□□□□□ -0.19
HDAC4-211ENST00000494800 TRAV18A0A075B6X5 111 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 G3V4G9 280 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 RRHO14718 337 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 SPDEFO95238 335 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 RPS16P62249 146 aaKnown RBP13.87□□□□□ -0.19
HDAC4-211ENST00000494800 SAMD5Q5TGI4 173 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 ZNF695Q8IW36 515 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 KLHL30-AS1Q8NEE0 82 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 NUDCD2Q8WVJ2 157 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 FLYWCH2Q96CP2 140 aaKnown RBP13.87□□□□□ -0.19
HDAC4-211ENST00000494800 ELF5Q9UKW6 265 aaPredicted RBP13.87□□□□□ -0.19
HDAC4-211ENST00000494800 CMYA5Q8N3K9 4069 aa13.87□□□□□ -0.19
HDAC4-211ENST00000494800 WIPF1O43516 503 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 DUS4LO95620 317 aaKnown RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 IGHG4P01861 327 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 LSM3P62310 102 aaKnown RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 PDLIM3Q53GG5 364 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 ZNF660Q6AZW8 331 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 CNIH2Q6PI25 160 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 TMEM65Q6PI78 240 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 H1FOOQ8IZA3 346 aaPredicted RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 ZNF383Q8NA42 475 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 WFDC9Q8NEX5 89 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 OR5H6Q8NGV6 325 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 SLC25A38Q96DW6 304 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 S100A16Q96FQ6 103 aaKnown RBP13.86□□□□□ -0.19
HDAC4-211ENST00000494800 ADTRPQ96IZ2 230 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 FBXL15Q9H469 300 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 SLC35D1Q9NTN3 355 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 SDHAF2Q9NX18 166 aa13.86□□□□□ -0.19
HDAC4-211ENST00000494800 IGHV7-81A0A0B4J1V7 117 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 ATP6V0E1O15342 81 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 PROP1O75360 226 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 SLC22A5O76082 557 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 RPLP1P05386 114 aaKnown RBP13.85□□□□□ -0.19
HDAC4-211ENST00000494800 RRASP10301 218 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 THBS3P49746 956 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 ARPC4P59998 168 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 TMEM267Q0VDI3 215 aaPredicted RBP13.85□□□□□ -0.19
HDAC4-211ENST00000494800 RTL8BQ17RB0 113 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 ABHD5Q8WTS1 349 aa13.85□□□□□ -0.19
HDAC4-211ENST00000494800 RCC1LQ96I51 464 aaKnown RBP13.85□□□□□ -0.19
HDAC4-211ENST00000494800 METTL1Q9UBP6 276 aaKnown RBP13.85□□□□□ -0.19
HDAC4-211ENST00000494800 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms