RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 P0C879 139 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 AKR1C2P52895 323 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 CATR1Q13166 79 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 ODF3L1Q8IXM7 274 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 ZNF295-AS1Q8N0V1 137 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 MUC15Q8N387 334 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 OR2C3Q8N628 320 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 TMED6Q8WW62 240 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 WFDC1Q9HC57 220 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 GFOD1Q9NXC2 390 aa13.66□□□□□ -0.22
ATG4B-225ENST00000494465 YLPM1P49750 1951 aaKnown RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 MFSD2BA6NFX1 497 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 SLC31A2O15432 143 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 IGHV3-7P01780 117 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 PAX9P55771 341 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 AANATQ16613 207 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 TCTEX1D2Q8WW35 142 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 HSD17B10Q99714 261 aaKnown RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 FAM212BQ9NTI7 297 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 LRBAP50851 2863 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 IGSF23A1L1A6 192 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 FAM24AA6NFZ4 105 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 ITGB1BP1O14713 200 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 FGF16O43320 207 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 CHST1O43916 411 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 MMP9P14780 707 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 GPR12P47775 334 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 SPAG16Q8N0X2 631 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 RNASE11Q8TAA1 199 aaKnown RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 LEAP2Q969E1 77 aa13.65□□□□□ -0.22
ATG4B-225ENST00000494465 LYRM2Q9NU23 88 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
ATG4B-225ENST00000494465 HRNRQ86YZ3 2850 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 IGHV1-69-2A0A0G2JMI3 117 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 B8ZZF3 427 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 FAM157CP0CG43 387 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 DUTP33316 252 aaKnown RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 EWSR1Q01844 656 aaKnown RBP eCLIP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 ZNF816Q0VGE8 651 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 LYPD2Q6UXB3 125 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 C1orf229Q6ZS94 237 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 TCTEX1D1Q8N7M0 179 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 MMP24Q9Y5R2 645 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 TEX46H3BTG2 121 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 MMP23AO75900 390 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 JTBO76095 146 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 S1PR2O95136 353 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 NDUFB7P17568 137 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 PVALBP20472 110 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-225ENST00000494465 UQCRFS1P47985 274 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 CT45A1Q5HYN5 189 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 NCR3LG1Q68D85 454 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 ZNF439Q8NDP4 499 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 CT45A3Q8NHU0 189 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 ARV1Q9H2C2 271 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 RAB9BQ9NP90 201 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 C19orf12Q9NSK7 152 aa13.64□□□□□ -0.23
ATG4B-225ENST00000494465 CAV2P51636 162 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 TOR2AQ5JU69 321 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 TMEM252Q8N6L7 170 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 IDI2-AS1Q9NZ38 188 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 CTSZQ9UBR2 303 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 LINC00312Q9Y6C7 94 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 SPTBN1Q01082 2364 aaKnown RBP13.63□□□□□ -0.23
ATG4B-225ENST00000494465 G6PCP35575 357 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 EIF5AP63241 154 aaKnown RBP13.63□□□□□ -0.23
ATG4B-225ENST00000494465 ZNF273Q14593 569 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 RPL39P5Q59GN2 51 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 ABHD14AQ9BUJ0 271 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 COA4Q9NYJ1 87 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 PLA2G2EQ9NZK7 142 aa13.63□□□□□ -0.23
ATG4B-225ENST00000494465 DCHS2Q6V1P9 2916 aa13.62□□□□□ -0.23
ATG4B-225ENST00000494465 hADV38S2A0JD32 116 aa13.62□□□□□ -0.23
ATG4B-225ENST00000494465 KRASP01116 189 aa13.62□□□□□ -0.23
ATG4B-225ENST00000494465 PFDN2Q9UHV9 154 aa13.62□□□□□ -0.23
ATG4B-225ENST00000494465 GAB2Q9UQC2 676 aa13.62□□□□□ -0.23
ATG4B-225ENST00000494465 VAMP2P63027 116 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 MEF2CQ06413 473 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-225ENST00000494465 MIDNQ504T8 468 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 TAS2R3Q9NYW6 316 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 KAAG1Q9UBP8 84 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 A0A1W2PPE3 182 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 WRBO00258 174 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 GNLYP22749 145 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 RPL31P62899 125 aaKnown RBP13.61□□□□□ -0.23
ATG4B-225ENST00000494465 PRAMEF5Q5TYX0 476 aa13.61□□□□□ -0.23
ATG4B-225ENST00000494465 RPUSD1Q9UJJ7 312 aaKnown RBP13.61□□□□□ -0.23
ATG4B-225ENST00000494465 I3L521 148 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 M0R1X1 148 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 ZG16O60844 167 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 NFYBP25208 207 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 RAB7AP51149 207 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 C4orf17Q53FE4 359 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 RNF141Q8WVD5 230 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 ITLN2Q8WWU7 325 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-225ENST00000494465 MARVELD3Q96A59 401 aa13.6□□□□□ -0.23
ATG4B-225ENST00000494465 ZNF251Q9BRH9 671 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms