RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ZNF729A6NN14 1252 aaPredicted RBP3.37□□□□□ -1.87
SMC2-205ENST00000493955 GABRA1P14867 456 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 HIST1H1CP16403 213 aaKnown RBP3.37□□□□□ -1.87
SMC2-205ENST00000493955 TGFBR2P37173 567 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 INPP1P49441 399 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 MMDQ15546 238 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 TBC1D28Q2M2D7 210 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 SUN5Q8TC36 379 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 GABARAPL1Q9H0R8 117 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 METTL9Q9H1A3 318 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 ZNF492Q9P255 531 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMC2-205ENST00000493955 ICOSQ9Y6W8 199 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 HTTP42858 3142 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 MYH13Q9UKX3 1938 aa3.37□□□□□ -1.87
SMC2-205ENST00000493955 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 GOLGA8KD6RF30 607 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 GOLGA8MH3BSY2 632 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CCRL2O00421 344 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CGB3P0DN86 165 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CGB7P0DN87 165 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMC2-205ENST00000493955 BIKQ13323 160 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CENPWQ5EE01 88 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 HENMT1Q5T8I9 393 aaKnown RBP3.36□□□□□ -1.87
SMC2-205ENST00000493955 SPNS3Q6ZMD2 512 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 MNS1Q8NEH6 495 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 C1orf64Q8NEQ6 169 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 OR2V2Q96R30 315 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 OR5H14A6NHG9 310 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 A8MWP4 228 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 H3BQ85 93 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 COCHO43405 550 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 HPGDSO60760 199 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 PDYNP01213 254 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 INAFM2P0DMQ5 153 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CD34P28906 385 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CLDN12P56749 244 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 FLI1Q01543 452 aaPredicted RBP3.36□□□□□ -1.87
SMC2-205ENST00000493955 MED21Q13503 144 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CASP8Q14790 479 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 C4orf26Q17RF5 130 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 PAGE2Q7Z2X7 111 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 OR5D18Q8NGL1 313 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 CMBLQ96DG6 245 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 TSSK6Q9BXA6 273 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
SMC2-205ENST00000493955 PLEKHJ1Q9NW61 149 aa3.36□□□□□ -1.87
SMC2-205ENST00000493955 PTPRFP10586 1907 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 MKI67P46013 3256 aaKnown RBP3.35□□□□□ -1.87
SMC2-205ENST00000493955 KIAA0100Q14667 2235 aaKnown RBP3.35□□□□□ -1.87
SMC2-205ENST00000493955 ARGFXA6NJG6 315 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 RTL8CO15255 209 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 GPR75O95800 540 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 IGKV1D-33P01593 117 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 IGKV1-33P01594 117 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 IGLV3-19P01714 112 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 ADORA1P30542 326 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 IL15RAQ13261 267 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 ZCWPW2Q504Y3 356 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 RPRMLQ8N4K4 120 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 TMEM251Q8N6I4 163 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 FER1L6-AS1Q8NA97 138 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 OR9I1Q8NGQ6 314 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 OR4A5Q8NH83 315 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 OR5K1Q8NHB7 308 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 KCTD4Q8WVF5 259 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 TMEM208Q9BTX3 173 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 TMEM216Q9P0N5 145 aa3.35□□□□□ -1.87
SMC2-205ENST00000493955 PHIPQ8WWQ0 1821 aa3.34□□□□□ -1.87
SMC2-205ENST00000493955 DOCK2Q92608 1830 aa3.34□□□□□ -1.87
SMC2-205ENST00000493955 CACNA1DQ01668 2161 aa3.34□□□□□ -1.87
SMC2-205ENST00000493955 SHANK1Q9Y566 2161 aa3.34□□□□□ -1.87
SMC2-205ENST00000493955 ATAD5Q96QE3 1844 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 BRCA2P51587 3418 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 RPS12P25398 132 aaKnown RBP3.34□□□□□ -1.88
SMC2-205ENST00000493955 AGTR1P30556 359 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 EVI2BP34910 448 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 KLF3P57682 345 aaPredicted RBP3.34□□□□□ -1.88
SMC2-205ENST00000493955 LRRC26Q2I0M4 334 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 HLA-DRB5Q30154 266 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 TCF23Q7RTU1 214 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 VN1R4Q7Z5H5 301 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 CPNE9Q8IYJ1 553 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 RIBC1Q8N443 379 aaPredicted RBP3.34□□□□□ -1.88
SMC2-205ENST00000493955 KRTCAP2Q8N6L1 136 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 SPPL2BQ8TCT7 592 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 TAMM41Q96BW9 452 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 CMTM5Q96DZ9 223 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 POTEKPQ9BYX7 375 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 OR2D2Q9H210 308 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 PARVGQ9HBI0 331 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 TAS2R1Q9NYW7 299 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 MTCH2Q9Y6C9 303 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 NOTCH2Q04721 2471 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 MED23Q9ULK4 1368 aa3.34□□□□□ -1.88
SMC2-205ENST00000493955 PLXNB2O15031 1838 aa3.33□□□□□ -1.88
SMC2-205ENST00000493955 DOCK3Q8IZD9 2030 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms