RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CTSEP14091 401 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 CNTFRP26992 372 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 HSD11B1P28845 292 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 NOVP48745 357 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 PSMB3P49720 205 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 DEFA6Q01524 100 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ABCA11PQ4W5N1 156 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 TIFABQ6ZNK6 161 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 Q6ZRU5 148 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ZNF695Q8IW36 515 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 YIPF7Q8N8F6 280 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 OR4A5Q8NH83 315 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 GALMQ96C23 342 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 LSM5Q9Y4Y9 91 aaKnown RBP2.93□□□□□ -1.94
VPS13A-212ENST00000493341 RALGAPBQ86X10 1494 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 THSD7AQ9UPZ6 1657 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ABCC6O95255 1503 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ARHGEF10O15013 1369 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 COL18A1P39060 1754 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 BCL9LQ86UU0 1499 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ZNF850A8MQ14 1090 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 IL4P05112 153 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 OR12D1P0DN82 309 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 HES3Q5TGS1 186 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 LCN8Q6JVE9 175 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 FAM131AQ6UXB0 335 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 SHANK2-AS3Q9BTD1 123 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 NYAP2Q9P242 653 aa2.93□□□□□ -1.94
VPS13A-212ENST00000493341 ZNF230Q9UIE0 474 aaPredicted RBP2.93□□□□□ -1.94
VPS13A-212ENST00000493341 RGS12O14924 1447 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 PIK3C2AO00443 1686 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 SLIT3O75094 1523 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 C7orf66A4D0T2 115 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 GMNCA6NCL1 334 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 K7ERS5 55 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 SULT1B1O43704 296 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 CDRT1O95170 752 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 KRT75O95678 551 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 ZNF708P17019 499 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 SULT1A1P50225 295 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 IDH3GP51553 393 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 TMEM267Q0VDI3 215 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 SRSF6Q13247 344 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 N4BP2L1Q5TBK1 243 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 DAZ4Q86SG3 579 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 AMN1Q8IY45 258 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 Q8N9L7 120 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 ACY3Q96HD9 319 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 ZNF717Q9BY31 904 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 PECRQ9BY49 303 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 GTSF1LQ9H1H1 148 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 DAZ1Q9NQZ3 744 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 ANAPC11Q9NYG5 84 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 IL37Q9NZH6 218 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 SSH2Q76I76 1423 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 RGPD1P0DJD0 1748 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 PARP4Q9UKK3 1724 aaKnown RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 RGPD3A6NKT7 1758 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 RGPD4Q7Z3J3 1758 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 F5H5P2 479 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 IGHV1-46P01743 117 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 GABRA3P34903 492 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 ERVS71-1P61550 626 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 JOSD1Q15040 202 aaPredicted RBP2.92□□□□□ -1.94
VPS13A-212ENST00000493341 HIST2H3PS2Q5TEC6 136 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 FAM173BQ6P4H8 233 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 IP6K3Q96PC2 410 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 OR7D2Q96RA2 312 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 MED18Q9BUE0 208 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 FAM60AQ9NP50 221 aa2.92□□□□□ -1.94
VPS13A-212ENST00000493341 TNS1Q9HBL0 1735 aaKnown RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 PLXNB3Q9ULL4 1909 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 SCN1AP35498 2009 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 FAM208AQ9UK61 1670 aaKnown RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 C5orf49A4QMS7 147 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 NSA2O95478 260 aaKnown RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 LHBP01229 141 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 NAA20P61599 178 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 HLA-DRB3P79483 266 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 CCL7P80098 99 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 TMED2Q15363 201 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 MAPK14Q16539 360 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 SPIN3Q5JUX0 258 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 FAM71E1Q6IPT2 247 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 ZFP62Q8NB50 900 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 OR5B17Q8NGF7 314 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 OR51H1Q8NH63 302 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 OR2V1Q8NHB1 315 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 IMP4Q96G21 291 aaKnown RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 GNB1LQ9BYB4 327 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 ALX4Q9H161 411 aaPredicted RBP2.91□□□□□ -1.94
VPS13A-212ENST00000493341 INIPQ9NRY2 104 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 SBF2Q86WG5 1849 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 NACAE9PAV3 2078 aa2.91□□□□□ -1.94
VPS13A-212ENST00000493341 PEAK1Q9H792 1746 aa2.9□□□□□ -1.94
VPS13A-212ENST00000493341 RGPD5Q99666 1765 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms