RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 MRPL30Q8TCC3 161 aaKnown RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 C1orf159Q96HA4 380 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 PCGF1Q9BSM1 259 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 MMP26Q9NRE1 261 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF230Q9UIE0 474 aaPredicted RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 TBL2Q9Y4P3 447 aaKnown RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 DOCK11Q5JSL3 2073 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 ANK3Q12955 4377 aaKnown RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 A0A1W2PPV4 95 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 KRBOX1C9JBD0 128 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 KCNJ3P48549 501 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 COMPP49747 757 aaPredicted RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 ERVFRD-1P60508 538 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 RBM39Q14498 530 aaKnown RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 RNASE10Q5GAN6 216 aaKnown RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 TMEM200BQ69YZ2 307 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 SLC35E4Q6ICL7 350 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 ZNF880Q6PDB4 577 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 CLEC9AQ6UXN8 241 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 C11orf42Q8N5U0 333 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 GVQW1Q8N7I0 195 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 LY6G5BQ8NDX9 201 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 OR13A1Q8NGR1 328 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 OR4K15Q8NH41 348 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 GPX8Q8TED1 209 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 DEDD2Q8WXF8 326 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 SSBP3Q9BWW4 388 aaPredicted RBP7.72□□□□□ -1.17
CSTF1-206ENST00000493039 ABCA1O95477 2261 aa7.72□□□□□ -1.17
CSTF1-206ENST00000493039 WNK2Q9Y3S1 2297 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 ODAMA1E959 279 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 A8MXK9 166 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 LANCL1O43813 399 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 CA11O75493 328 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 ANXA7P20073 488 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 ATP5IP56385 69 aaPredicted RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 EDDM3BP56851 147 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 GNB2P62879 340 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 LCN2P80188 198 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 DGCR2P98153 550 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 CR1LQ2VPA4 569 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 NCR3LG1Q68D85 454 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 OR52I2Q8NH67 350 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 C8orf46Q8TAG6 207 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 CCDC107Q8WV48 283 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 RAB24Q969Q5 203 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 RRNAD1Q96FB5 475 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 CMSS1Q9BQ75 279 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 MBNL3Q9NUK0 354 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 KLK11Q9UBX7 282 aa7.71□□□□□ -1.17
CSTF1-206ENST00000493039 RPUSD1Q9UJJ7 312 aaKnown RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 POLR3KQ9Y2Y1 108 aaPredicted RBP7.71□□□□□ -1.17
CSTF1-206ENST00000493039 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 YLPM1P49750 1951 aaKnown RBP7.71□□□□□ -1.18
CSTF1-206ENST00000493039 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.71□□□□□ -1.184e-6■□□□□ 9.7
CSTF1-206ENST00000493039 ZFHX3Q15911 3703 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 ELOA3CA0A087WX78 387 aaPredicted RBP7.71□□□□□ -1.18
CSTF1-206ENST00000493039 MEIKINA0A087WXM9 373 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 TRBV6-6A0A0A6YYG2 114 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 MEIS3P1A6NDR6 274 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 ADAP1O75689 374 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 DDTP30046 118 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 PRSS3P35030 304 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 DLX6P56179 175 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.18
CSTF1-206ENST00000493039 UTF1Q5T230 341 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 FAM131AQ6UXB0 335 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 SRRQ9GZT4 340 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 SMPXQ9UHP9 88 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 CR1P17927 2039 aa7.71□□□□□ -1.18
CSTF1-206ENST00000493039 TMEM30CPA0ZSE6 113 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 F8WDY8 70 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 K7EP13 123 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 CTDSPLO15194 276 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 FCGR3AP08637 254 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 ARFRP1Q13795 201 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 GUK1Q16774 197 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 C17orf58Q2M2W7 97 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 SPANXN2Q5MJ10 180 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 FAM53AQ6NSI3 398 aaPredicted RBP7.7□□□□□ -1.18
CSTF1-206ENST00000493039 LYSMD2Q8IV50 215 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 UBALD1Q8TB05 177 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 H1FXQ92522 213 aaKnown RBP7.7□□□□□ -1.18
CSTF1-206ENST00000493039 RAB39BQ96DA2 213 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 Q9N2K0 584 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 GSKIPQ9P0R6 139 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 ANAPC10Q9UM13 185 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 DSCAML1Q8TD84 2053 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 LOC105371242A0A075B767 164 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 A0A1B0GW15 77 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 C15orf65H3BRN8 121 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 MMP23AO75900 390 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 RD3LP0DJH9 198 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 CCL3L1P16619 93 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 CEACAM3P40198 252 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 GAMTQ14353 236 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 BAK1Q16611 211 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 TMEM249Q2WGJ8 235 aa7.7□□□□□ -1.18
CSTF1-206ENST00000493039 RNASE12Q5GAN4 147 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms