RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 YIF1AO95070 293 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 CLUP10909 449 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 RAP1BP61224 184 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 EGR3Q06889 387 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 FAM189A2Q15884 450 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 FAAP20Q6NZ36 180 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 TMED4Q7Z7H5 227 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 FAM24BQ8N5W8 94 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 BHLHE23Q8NDY6 225 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 PTX4Q96A99 478 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 BPIFA2Q96DR5 249 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 GFI1Q99684 422 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 OR52A1Q9UKL2 312 aa10.77□□□□□ -0.69
HDAC3-213ENST00000492506 TRAV27A0A087WT01 109 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 IFITM10A6NMD0 228 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF736B4DX44 427 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-213ENST00000492506 CD3DP04234 171 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 AMY2AP04746 511 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 CTLA4P16410 223 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 SNCAP37840 140 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 LPAR6P43657 344 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 PRSS12P56730 875 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 CRMP1Q14194 572 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 RAB11BQ15907 218 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 GUK1Q16774 197 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF674Q2M3X9 581 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-213ENST00000492506 AKIRIN2Q53H80 203 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 OR5L1Q8NGL2 311 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 OR51A7Q8NH64 312 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 ERGIC1Q969X5 290 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 APOBEC3DQ96AK3 386 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-213ENST00000492506 BSCL2Q96G97 398 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-213ENST00000492506 RCC1LQ96I51 464 aaKnown RBP10.76□□□□□ -0.69
HDAC3-213ENST00000492506 WDR76Q9H967 626 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 SPACA1Q9HBV2 294 aa10.76□□□□□ -0.69
HDAC3-213ENST00000492506 DNAH9Q9NYC9 4486 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 TRBV5-7A0A0A0MS05 114 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 FAM183AA6NL82 134 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 RER1O15258 196 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 CSTBP04080 98 aaKnown RBP10.75□□□□□ -0.69
HDAC3-213ENST00000492506 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
HDAC3-213ENST00000492506 SEC11BP0C7V7 166 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 IRF2P14316 349 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 CD200P41217 278 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 ARF6P62330 175 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 ATXN7L3Q14CW9 347 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-213ENST00000492506 C21orf62-AS1Q17RA5 79 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 KHDC3LQ587J8 217 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 PRAMEF6Q5VXH4 476 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 TMEM268Q5VZI3 342 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 Q6ZRG5 221 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 COLCA1Q6ZS62 124 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 SLC24A4Q8NFF2 622 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 OR13C5Q8NGS8 318 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 OR14K1Q8NGZ2 314 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 OR10J5Q8NHC4 309 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 Q96M85 177 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 PACRGQ96M98 296 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-213ENST00000492506 SELENOIQ9C0D9 397 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 SLC5A7Q9GZV3 580 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 COMMD4Q9H0A8 199 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 ZNRD1Q9P1U0 126 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF230Q9UIE0 474 aaPredicted RBP10.75□□□□□ -0.69
HDAC3-213ENST00000492506 VPREB3Q9UKI3 123 aa10.75□□□□□ -0.69
HDAC3-213ENST00000492506 BORCS7-ASMTA0A0B4J1R7 106 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 PRSS37A4D1T9 235 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 C5orf51A6NDU8 294 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 PPP5D1E7EU14 171 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 HERPUD1Q15011 391 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 KRTAP27-1Q3LI81 207 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 LRRC37A5PQ49AS3 106 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 TP53I3Q53FA7 332 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 GGNBP1Q5YKI7 109 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 SCCPDHQ8NBX0 429 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 OR13C2Q8NGS9 318 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 OR11L1Q8NGX0 322 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 DTD1Q8TEA8 209 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 SECTM1Q8WVN6 248 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 FBLN5Q9UBX5 448 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 GNG8Q9UK08 70 aa10.74□□□□□ -0.69
HDAC3-213ENST00000492506 TRAV18A0A075B6X5 111 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 A0A1W2PPQ1 181 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 TMEM212A6NML5 194 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 DCTN6O00399 190 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 SLC17A2O00624 439 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 ADAM20O43506 726 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 PMP2P02689 132 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF735P0CB33 412 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 ZNF25P17030 456 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-213ENST00000492506 CLDN12P56749 244 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 LOXL3P58215 753 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 PLA2G7Q13093 441 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 KCNMB1Q16558 191 aa10.73□□□□□ -0.69
HDAC3-213ENST00000492506 IQCJQ1A5X6 159 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms