RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNF343Q6P1L6 599 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 BEND4Q6ZU67 534 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 BHLHA15Q7RTS1 189 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-220ENST00000492280 TGIF2LYQ8IUE0 185 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 IL22RA2Q969J5 263 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 HES4Q9HCC6 221 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF71Q9NQZ8 489 aaPredicted RBP10.41□□□□□ -0.74
HMGN1-220ENST00000492280 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 MMP24Q9Y5R2 645 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 SPRY3O43610 288 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 BMP5P22003 454 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 RAB5CP51148 216 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF525Q8N782 197 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 NINJ1Q92982 152 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 PBDC1Q9BVG4 233 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 CXXC4Q9H2H0 198 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 RBKSQ9H477 322 aa10.41□□□□□ -0.74
HMGN1-220ENST00000492280 ODAMA1E959 279 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 NPIPB11E5RHQ5 1161 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 ZG16O60844 167 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 TAS2R30P59541 319 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 BAXQ07812 192 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 ICAM4Q14773 271 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF718Q3SXZ3 478 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 ADAM5Q6NVV9 412 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 ZNF474Q6S9Z5 364 aaPredicted RBP10.4□□□□□ -0.74
HMGN1-220ENST00000492280 OR4C12Q96R67 309 aa10.4□□□□□ -0.74
HMGN1-220ENST00000492280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.4□□□□□ -0.75
HMGN1-220ENST00000492280 IFNA5P01569 189 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 EDDM3BP56851 147 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 UBE2KP61086 200 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 IGFL2Q6UWQ7 119 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 MOGAT3Q86VF5 341 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF645Q8N7E2 425 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 DCAF16Q9NXF7 216 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 FAM215AQ9Y5M1 114 aa10.4□□□□□ -0.75
HMGN1-220ENST00000492280 CHD8Q9HCK8 2581 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 TMEM210A6NLX4 147 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 SCAF4O95104 1147 aaKnown RBP10.39□□□□□ -0.75
HMGN1-220ENST00000492280 TCF15Q12870 199 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 FIP1L1Q6UN15 594 aaKnown RBP10.39□□□□□ -0.75
HMGN1-220ENST00000492280 DEFB108BQ8NET1 73 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RAI1Q7Z5J4 1906 aaPredicted RBP10.39□□□□□ -0.75
HMGN1-220ENST00000492280 PLXNB1O43157 2135 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 DSCAML1Q8TD84 2053 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 CGAP01215 116 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 IGKV1D-33P01593 117 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 IGKV1-33P01594 117 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RAB2AP61019 212 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RPS23P62266 143 aaKnown RBP10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RPL39P5Q59GN2 51 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 OR2V2Q96R30 315 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 RAB40CQ96S21 281 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 TMPRSS5Q9H3S3 457 aa10.39□□□□□ -0.75
HMGN1-220ENST00000492280 COL6A6A6NMZ7 2263 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 H3BQ15 152 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 J3QW42 95 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SRP19P09132 144 aaKnown RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SLC38A11Q08AI6 406 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SMIM21Q3B7S5 101 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 LINC00518Q8N0U6 118 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 PLSCR4Q9NRQ2 329 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 ERVFRD-1P60508 538 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 RAB11AP62491 216 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 TNFRSF9Q07011 255 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 TFF3Q07654 80 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 FAM27E3Q08E93 113 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 NCR3LG1Q68D85 454 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 RBMS3Q6XE24 437 aaKnown RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 ZCCHC24Q8N2G6 241 aaKnown RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 GCSAMQ8N6F7 178 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SCGB1C1Q8TD33 95 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 LSM10Q969L4 123 aaKnown RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SNRNP40Q96DI7 357 aaKnown RBP10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SLC25A22Q9H936 323 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 KIAA1456Q9P272 454 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 GNG12Q9UBI6 72 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 SLC25A15Q9Y619 301 aa10.38□□□□□ -0.75
HMGN1-220ENST00000492280 NCOR2Q9Y618 2525 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 COL12A1Q99715 3063 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 KLK10O43240 276 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 PROP1O75360 226 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 IGLV1-44P01699 117 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 PRDX2P32119 198 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 ZNF787Q6DD87 383 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 IQCF2Q8IXL9 164 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 ZADH2Q8N4Q0 377 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 COMMD1Q8N668 190 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 RCC1LQ96I51 464 aaKnown RBP10.37□□□□□ -0.75
HMGN1-220ENST00000492280 NAV3Q8IVL0 2385 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 SLC31A2O15432 143 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 NDUFA2O43678 99 aa10.37□□□□□ -0.75
HMGN1-220ENST00000492280 KITLGP21583 273 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms