RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 C14orf79Q96F83 325 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 C5orf30Q96GV9 206 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 MRPL37Q9BZE1 423 aaKnown RBP8.94□□□□□ -0.98
USP4-214ENST00000491791 SMIM3Q9BZL3 60 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 GCM1Q9NP62 436 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 OR6C3Q9NZP0 311 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 HSPB7Q9UBY9 170 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 PPP1R3CQ9UQK1 317 aa8.94□□□□□ -0.98
USP4-214ENST00000491791 RNASEK-C17orf49H0YIS7 233 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 WRBO00258 174 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 RAB29O14966 203 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 SCAF4O95104 1147 aaKnown RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 CLDN14O95500 239 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 IGHV1-46P01743 117 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 MUC1P15941 1255 aaPredicted RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 BMP5P22003 454 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 TNFSF4P23510 183 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 LOXL3P58215 753 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 RBPJQ06330 500 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 MORN2Q502X0 79 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 PRR30Q53SZ7 412 aaPredicted RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 STUMQ69YW2 141 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 Q6ZRG5 221 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 C22orf34Q6ZV56 151 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 MOGAT3Q86VF5 341 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 STX12Q86Y82 276 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 SVBPQ8N300 66 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 CISD2Q8N5K1 135 aaKnown RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 LFNGQ8NES3 379 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 OR52L2PQ8NGH6 319 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 MRGPRDQ8TDS7 321 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 ITLN1Q8WWA0 313 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 ATP5SQ99766 215 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 VKORC1Q9BQB6 163 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 RBM7Q9Y580 266 aaKnown RBP8.93□□□□□ -0.98
USP4-214ENST00000491791 CACNA1DQ01668 2161 aa8.93□□□□□ -0.98
USP4-214ENST00000491791 TRAV1-1A0A0B4J248 108 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 DPRXA6NFQ7 191 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 PPIHO43447 177 aaKnown RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 SCO1O75880 301 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 APOC3P02656 99 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 THBDP07204 575 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 ATP6V0CP27449 155 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 SNCAP37840 140 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 RPL30P62888 115 aaKnown RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 TAGLNQ01995 201 aaKnown RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 ZNF273Q14593 569 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 FBXL19-AS1Q494R0 122 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 PDLIM3Q53GG5 364 aaPredicted RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 SPRNQ5BIV9 151 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 TMEM14EPQ6UXP3 125 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 ZNF788Q6ZQV5 615 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 CENPVQ7Z7K6 275 aaPredicted RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 PRR18Q8N4B5 295 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 OR10A7Q8NGE5 316 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 OR5C1Q8NGR4 320 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 SNRNP40Q96DI7 357 aaKnown RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 PSMG3Q9BT73 122 aaPredicted RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 MAGT1Q9H0U3 335 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 OR2D2Q9H210 308 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.92□□□□□ -0.98
USP4-214ENST00000491791 C19orf12Q9NSK7 152 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 CACNG5Q9UF02 275 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 KCNS2Q9ULS6 477 aa8.92□□□□□ -0.98
USP4-214ENST00000491791 CRYBG3Q68DQ2 2970 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 IGHV3-64DA0A0J9YX35 117 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 CLDN1O95832 211 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 H2AFB1P0C5Y9 115 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 RNF224P0DH78 156 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 TNFRSF1AP19438 455 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 SSTR5P35346 364 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 PPP1CCP36873 323 aaKnown RBP8.91□□□□□ -0.98
USP4-214ENST00000491791 RAB7AP51149 207 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 DYNLT3P51808 116 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 AKR1C2P52895 323 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 TNFAIP6P98066 277 aaPredicted RBP8.91□□□□□ -0.98
USP4-214ENST00000491791 TNFRSF9Q07011 255 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 PMS2P11Q13670 270 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 Q3ZCU0 254 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 PUSL1Q8N0Z8 303 aaKnown RBP8.91□□□□□ -0.98
USP4-214ENST00000491791 LRRC46Q96FV0 321 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 ZNF665Q9H7R5 613 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 NGBQ9NPG2 151 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
USP4-214ENST00000491791 ABCA12Q86UK0 2595 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 KBTBD11-OT1A0A1B0GTJ5 212 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 LRRC30A6NM36 301 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 C17orf100A8MU93 164 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 C17orf98A8MV24 154 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 VSTM5A8MXK1 200 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 DNASE2O00115 360 aaPredicted RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 TNFRSF13BO14836 293 aaPredicted RBP8.9□□□□□ -0.98
USP4-214ENST00000491791 SPRY3O43610 288 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 PROP1O75360 226 aa8.9□□□□□ -0.98
USP4-214ENST00000491791 FSTL3O95633 263 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms