RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 BEAN1Q3B7T3 259 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 HACD4Q5VWC8 232 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 ETV3LQ6ZN32 361 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 NPBQ8NG41 125 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 OR5AN1Q8NGI8 311 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 OR8U1Q8NH10 309 aa14.23□□□□□ -0.13
COL9A3-214ENST00000490398 IGHV7-81A0A0B4J1V7 117 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 FCN1O00602 326 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 AIREO43918 545 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 NDUFA3O95167 84 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 RPLP1P05386 114 aaKnown RBP14.22□□□□□ -0.13
COL9A3-214ENST00000490398 PF4V1P10720 104 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 TALDO1P37837 337 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 RPS19P39019 145 aaKnown RBP14.22□□□□□ -0.13
COL9A3-214ENST00000490398 RPL23AP62750 156 aaKnown RBP14.22□□□□□ -0.13
COL9A3-214ENST00000490398 NDPQ00604 133 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 KIR2DS1Q14954 304 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 C5orf64Q2M2E5 130 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 PHF21AQ96BD5 680 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 ST6GALNAC5Q9BVH7 336 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 FBXL15Q9H469 300 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 NOTCH3Q9UM47 2321 aa14.22□□□□□ -0.13
COL9A3-214ENST00000490398 G3V318 75 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 J3QRK9 145 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 M0R1X1 148 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 PRB2P02812 416 aaPredicted RBP14.21□□□□□ -0.13
COL9A3-214ENST00000490398 IGKV1-16P04430 117 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 SMIM18P0DKX4 95 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 PTHLHP12272 177 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 DTYMKP23919 212 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 SERPINB10P48595 397 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 SRSF7Q16629 238 aaKnown RBP eCLIP14.21□□□□□ -0.13
COL9A3-214ENST00000490398 Q6ZS49 121 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 OR10J5Q8NHC4 309 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 OR2D2Q9H210 308 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 SDHAF2Q9NX18 166 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 ZNF221Q9UK13 617 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 WASHC3Q9Y3C0 194 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 WSB1Q9Y6I7 421 aa14.21□□□□□ -0.13
COL9A3-214ENST00000490398 PLXNB1O43157 2135 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 TRAV18A0A075B6X5 111 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 OR5H14A6NHG9 310 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 H7C2Y5 167 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 ATP6V0E1O15342 81 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 HLA-DRB1P01911 266 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 IGF1P05019 195 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 GSTP1P09211 210 aaKnown RBP14.2□□□□□ -0.14
COL9A3-214ENST00000490398 IGLL1P15814 213 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 SLC35B1P78383 322 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 PNLIPRP3Q17RR3 467 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 PDLIM3Q53GG5 364 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-214ENST00000490398 C8orf86Q6ZUL3 223 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 H1FOOQ8IZA3 346 aaPredicted RBP14.2□□□□□ -0.14
COL9A3-214ENST00000490398 WFDC9Q8NEX5 89 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 DUX3Q96PT4 197 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 GHITMQ9H3K2 345 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 GAB2Q9UQC2 676 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 ETV7Q9Y603 341 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 TGP01266 2768 aa14.2□□□□□ -0.14
COL9A3-214ENST00000490398 TFAP2AP05549 437 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 NCS1P62166 190 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 LIN54Q6MZP7 749 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 OR51J1Q9H342 316 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 PARP11Q9NR21 331 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 TPSG1Q9NRR2 321 aa14.19□□□□□ -0.14
COL9A3-214ENST00000490398 RRHO14718 337 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 FCER2P06734 321 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 NFYAP23511 347 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-214ENST00000490398 PPIFP30405 207 aaKnown RBP14.18□□□□□ -0.14
COL9A3-214ENST00000490398 MC5RP33032 325 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 GNG2P59768 71 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 ARL6IP1Q15041 203 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 PSG5Q15238 335 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 TIMM50Q3ZCQ8 353 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 KPRPQ5T749 579 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-214ENST00000490398 TEX38Q6PEX7 206 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 GVQW1Q8N7I0 195 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 LINC00482Q8N8I6 264 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 CLCC1Q96S66 551 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 GINS4Q9BRT9 223 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 FUNDC2Q9BWH2 189 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 KLK15Q9H2R5 256 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 VCX3AQ9NNX9 186 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 KIAA1456Q9P272 454 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 SPATA2Q9UM82 520 aa14.18□□□□□ -0.14
COL9A3-214ENST00000490398 DIRAS3O95661 229 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 IGHG4P01861 327 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 PF4P02776 101 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 EGR2P11161 476 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-214ENST00000490398 VDAC1P21796 283 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 SCAND1P57086 179 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 DEFB136Q30KP8 78 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 MRPL41Q8IXM3 137 aaKnown RBP14.17□□□□□ -0.14
COL9A3-214ENST00000490398 RNF152Q8N8N0 203 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 KLHL30-AS1Q8NEE0 82 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 OR13F1Q8NGS4 319 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 NAA50Q9GZZ1 169 aaKnown RBP14.17□□□□□ -0.14
COL9A3-214ENST00000490398 SLC35D1Q9NTN3 355 aa14.17□□□□□ -0.14
COL9A3-214ENST00000490398 ZFP57Q9NU63 452 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms