RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PARP12Q9H0J9 701 aaKnown RBP10.58□□□□□ -0.72
VARS-227ENST00000489979 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 ABRACLQ9P1F3 81 aa10.58□□□□□ -0.72
VARS-227ENST00000489979 PEF1Q9UBV8 284 aaKnown RBP10.58□□□□□ -0.72
VARS-227ENST00000489979 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 TPPPO94811 219 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 LY6G6CO95867 125 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 CPEP16870 476 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 FSTP19883 344 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 MECP2P51608 486 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 RPS16P62249 146 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 TATDN3Q17R31 274 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 Q499Y3 187 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 TMPRSS11AQ6ZMR5 421 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 DEFB125Q8N687 156 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 DRAXINQ8NBI3 349 aaPredicted RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 TSNAXQ99598 290 aaKnown RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 SULT4A1Q9BR01 284 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 NEURL2Q9BR09 285 aa10.57□□□□□ -0.72
VARS-227ENST00000489979 FGF20Q9NP95 211 aaPredicted RBP10.57□□□□□ -0.72
VARS-227ENST00000489979 TRBV5-7A0A0A0MS05 114 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 SPDEFO95238 335 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 CNIH1O95406 144 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 LALBAP00709 142 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 IGKV1-16P04430 117 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 RASSF2P50749 326 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 RPS11P62280 158 aaKnown RBP eCLIP10.56□□□□□ -0.72
VARS-227ENST00000489979 SSBP2P81877 361 aaPredicted RBP10.56□□□□□ -0.72
VARS-227ENST00000489979 DYRK1AQ13627 763 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 RPEL1Q2QD12 228 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 ZNF343Q6P1L6 599 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 OR2K2Q8NGT1 345 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 APH1BQ8WW43 257 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 PYDC1Q8WXC3 89 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 FAAP24Q9BTP7 215 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 BABAM2Q9NXR7 383 aa10.56□□□□□ -0.72
VARS-227ENST00000489979 H3BNX3 289 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 CD7P09564 240 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 AADACP22760 399 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 CAPGP40121 348 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 LINC00205P59089 165 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 SMN1Q16637 294 aaKnown RBP10.55□□□□□ -0.72
VARS-227ENST00000489979 CD300EQ496F6 205 aaPredicted RBP10.55□□□□□ -0.72
VARS-227ENST00000489979 YIF1BQ5BJH7 314 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 CDH26Q8IXH8 852 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 CBR4Q8N4T8 237 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 SVOPQ8N4V2 548 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 ZFP41Q8N8Y5 198 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 BVESQ8NE79 360 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 SETD6Q8TBK2 473 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 TINAGL1Q9GZM7 467 aaPredicted RBP10.55□□□□□ -0.72
VARS-227ENST00000489979 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 SLC2A8Q9NY64 477 aa10.55□□□□□ -0.72
VARS-227ENST00000489979 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 ITGB1BP1O14713 200 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 PROP1O75360 226 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 ATP5HO75947 161 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 OR2A4O95047 310 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 DCKP27707 260 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 PJVKQ0ZLH3 352 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 C6orf201Q7Z4U5 140 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 LAX1Q8IWV1 398 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 ZNF383Q8NA42 475 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 PGLYRP3Q96LB9 341 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
VARS-227ENST00000489979 CHMP1AQ9HD42 196 aaPredicted RBP10.54□□□□□ -0.72
VARS-227ENST00000489979 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
VARS-227ENST00000489979 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 OR11H12B2RN74 326 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 RBMXL2O75526 392 aaKnown RBP10.53□□□□□ -0.72
VARS-227ENST00000489979 NAPSAO96009 420 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 CEACAM6P40199 344 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 LGALS7P47929 136 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 ZNF880Q6PDB4 577 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 PDPNQ86YL7 162 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 SNAPC3Q92966 411 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 USMG5Q96IX5 58 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 UQCC2Q9BRT2 126 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 ST6GALNAC5Q9BVH7 336 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 COA4Q9NYJ1 87 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 OR1A1Q9P1Q5 309 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 CLEC2DQ9UHP7 191 aa10.53□□□□□ -0.72
VARS-227ENST00000489979 A0A0B4J203 849 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 AIREO43918 545 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 WBP4O75554 376 aaKnown RBP10.52□□□□□ -0.73
VARS-227ENST00000489979 CIB2O75838 187 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 APOA2P02652 100 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 APELAP0DMC3 54 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 PMS2P11Q13670 270 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 OR10K2Q6IF99 312 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 EDARADDQ8WWZ3 215 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 DDB2Q92466 427 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 DERL3Q96Q80 235 aa10.52□□□□□ -0.73
VARS-227ENST00000489979 SLC29A1Q99808 456 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms