RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CD2P06729 351 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 IGHV3-43DP0DP04 118 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 GTF2F2P13984 249 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 DCKP27707 260 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 BDKRB2P30411 391 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SOX6P35712 828 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ZNF93P35789 620 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ETV1P50549 477 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 TMEM30BQ3MIR4 351 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 MORN2Q502X0 79 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 LY6G6FQ5SQ64 297 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SYT6Q5T7P8 510 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 DMKNQ6E0U4 476 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SIGIRRQ6IA17 410 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ZFP1Q6P2D0 407 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 CDH26Q8IXH8 852 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ODF3L1Q8IXM7 274 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 MINDY2Q8NBR6 621 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 OR11H1Q8NG94 326 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 TSEN15Q8WW01 171 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 ORAI1Q96D31 301 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 MRPS24Q96EL2 167 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 UBE2E2Q96LR5 201 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 RDH12Q96NR8 316 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 FAM192AQ9GZU8 254 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 GNB4Q9HAV0 340 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SPACA1Q9HBV2 294 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 PAK1IP1Q9NWT1 392 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 BABAM2Q9NXR7 383 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 DNAH1Q9P2D7 4330 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 SORL1Q92673 2214 aa4.91□□□□□ -1.62
PRPF40A-210ENST00000489741 RYR2Q92736 4967 aa4.9□□□□□ -1.62
PRPF40A-210ENST00000489741 TRAV8-7A0A075B6U6 113 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 IGHV7-81A0A0B4J1V7 117 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 MAGEA13PA6NCF6 341 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 FAM90A7PA6NKC0 464 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 FAM90A23PA8MXZ1 464 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 G3V318 75 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 AIPO00170 330 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 DYNC1I1O14576 645 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 SPINT2O43291 252 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 CA11O75493 328 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 CIB2O75838 187 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 HLA-DRB1P01911 266 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 HBZP02008 142 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 CSTBP04080 98 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 FGF2P09038 288 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR8U8P0C7N1 319 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR5H8P0DN80 308 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 RCC1P18754 421 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 SERPINA2P20848 420 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 VDAC1P21796 283 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 IL3RAP26951 378 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 RAB9AP51151 201 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 RAB25P57735 213 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 NANOS2P60321 138 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 GNB1P62873 340 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ADARB1P78563 741 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 HTD2P86397 168 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 RIPK1Q13546 671 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 GPR176Q14439 515 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 SLC22A6Q4U2R8 563 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 PIK3CD-AS1Q5SR53 167 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 C6orf141Q5SZD1 244 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ATAD3CQ5T2N8 411 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 DDI2Q5TDH0 399 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR2G6Q5TZ20 316 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 C5orf24Q7Z6I8 188 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF554Q86TJ5 538 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF429Q86V71 674 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 SBSPONQ8IVN8 264 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 NPBQ8NG41 125 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR1N2Q8NGR9 330 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR1L1Q8NH94 360 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 GHSRQ92847 366 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 SMIM19Q96E16 107 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 PGLYRP3Q96LB9 341 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF184Q99676 751 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ASCL2Q99929 193 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 NABP2Q9BQ15 211 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 OR51J1Q9H342 316 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF107Q9UII5 783 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 TRAPPC2LQ9UL33 140 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 VSIG4Q9Y279 399 aa4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF256Q9Y2P7 627 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-210ENST00000489741 MCRIP1C9JLW8 97 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 SOX15O60248 233 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 YPEL1O60688 119 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 NDUFA3O95167 84 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 CD37P11049 281 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 FUT3P21217 361 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 CNTFRP26992 372 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 PPP3R1P63098 170 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 ZNF616Q08AN1 781 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 C5orf64Q2M2E5 130 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 Q499Y3 187 aa4.89□□□□□ -1.63
PRPF40A-210ENST00000489741 CASC10Q5T4H9 136 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms