RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 NDUFA13Q9P0J0 144 aa8.84□□□□□ -0.99
CPSF7-212ENST00000489728 RSL24D1Q9UHA3 163 aaKnown RBP8.84□□□□□ -0.99
CPSF7-212ENST00000489728 OR2W1Q9Y3N9 320 aa8.84□□□□□ -0.99
CPSF7-212ENST00000489728 ANK2Q01484 3957 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 RGS5O15539 181 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 OR8U9P0C7N5 309 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 RCVRNP35243 200 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 LUMP51884 338 aaPredicted RBP8.83□□□□□ -1
CPSF7-212ENST00000489728 CDK10Q15131 360 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 RPL39P5Q59GN2 51 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 GVQW1Q8N7I0 195 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 C5orf56Q8N8D9 126 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 OR8U1Q8NH10 309 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 SNAPC3Q92966 411 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 ADTRPQ96IZ2 230 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 SLIRPQ9GZT3 109 aaKnown RBP8.83□□□□□ -1
CPSF7-212ENST00000489728 NXF2Q9GZY0 626 aaKnown RBP8.83□□□□□ -1
CPSF7-212ENST00000489728 LIN7CQ9NUP9 197 aaKnown RBP8.83□□□□□ -1
CPSF7-212ENST00000489728 EXTL2Q9UBQ6 330 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 WASHC3Q9Y3C0 194 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 RBM7Q9Y580 266 aaKnown RBP8.83□□□□□ -1
CPSF7-212ENST00000489728 A3GALT2U3KPV4 340 aa8.83□□□□□ -1
CPSF7-212ENST00000489728 IGHV3-72A0A0B4J1Y9 119 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 CCDC160A6NGH7 325 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 H0YJW9 148 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 APOA2P02652 100 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 AMY1AP04745 511 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 AMY2AP04746 511 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 CT45A6P0DMU7 189 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 CT45A5P0DMU8 189 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 CT45A7P0DMV0 189 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 OR5H8P0DN80 308 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 ACTBP60709 375 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 FBLN7Q53RD9 439 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 ACTBL2Q562R1 376 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 PDPNQ86YL7 162 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 BORCS5Q969J3 196 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 CITED1Q99966 193 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 WNT10AQ9GZT5 417 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 MIXL1Q9H2W2 232 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 SERTAD4Q9NUC0 356 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 ZNF580Q9UK33 172 aa8.82□□□□□ -1
CPSF7-212ENST00000489728 MRPS7Q9Y2R9 242 aaKnown RBP8.82□□□□□ -1
CPSF7-212ENST00000489728 M0R1X1 148 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 CTDSPLO15194 276 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 KCNAB3O43448 404 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 PROP1O75360 226 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 SPDEFO95238 335 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 RRASP10301 218 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 PTHLHP12272 177 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 TBPP20226 339 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 VDAC2P45880 294 aaPredicted RBP8.81□□□□□ -1
CPSF7-212ENST00000489728 THBS3P49746 956 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 BLCAPP62952 87 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 SSBP1Q04837 148 aaKnown RBP8.81□□□□□ -1
CPSF7-212ENST00000489728 CBX3Q13185 183 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 DYRK1AQ13627 763 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 ABCA11PQ4W5N1 156 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 ARSJQ5FYB0 599 aaPredicted RBP8.81□□□□□ -1
CPSF7-212ENST00000489728 FAM131AQ6UXB0 335 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 OVCH2Q7RTZ1 564 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 SNX29P2Q8IUI4 249 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 LAX1Q8IWV1 398 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 FAM71E2Q8N5Q1 922 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 Q8N9W7 124 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 NPBQ8NG41 125 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 OR5H2Q8NGV7 314 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 MCFD2Q8NI22 146 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 GIMAP1Q8WWP7 306 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 TAF15Q92804 592 aaKnown RBP eCLIP8.81□□□□□ -1
CPSF7-212ENST00000489728 MMP27Q9H306 513 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 PLSCR3Q9NRY6 295 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 SDHAF2Q9NX18 166 aa8.81□□□□□ -1
CPSF7-212ENST00000489728 ZNF107Q9UII5 783 aaPredicted RBP8.81□□□□□ -1
CPSF7-212ENST00000489728 NCBP2LA6PVI3 153 aaKnown RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 ZNF736B4DX44 427 aaPredicted RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 GABARAPH6UMI1 98 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 CTDSP2O14595 271 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 NBR2O15453 112 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 NDUFA3O95167 84 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 PPYP01298 95 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 IGHG2P01859 326 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 NFYAP23511 347 aaPredicted RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 FCGR2CP31995 323 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 HNF4GQ14541 408 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 MMDQ15546 238 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 RTL8BQ17RB0 113 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 PYHIN1Q6K0P9 492 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 DHRS11Q6UWP2 260 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 ZBTB34Q8NCN2 500 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 WIPF2Q8TF74 440 aaPredicted RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 FCAMRQ8WWV6 532 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 RASL11BQ9BPW5 248 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 C6orf62Q9GZU0 229 aaPredicted RBP8.8□□□□□ -1
CPSF7-212ENST00000489728 EHFQ9NZC4 300 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 RNF150Q9ULK6 438 aa8.8□□□□□ -1
CPSF7-212ENST00000489728 MEIS3P1A6NDR6 274 aa8.79□□□□□ -1
CPSF7-212ENST00000489728 H7C2Y5 167 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms