RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 RPS16P62249 146 aaKnown RBP12.94□□□□□ -0.34
TOP3B-217ENST00000489581 KLF5Q13887 457 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-217ENST00000489581 FXYD3Q14802 87 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 OR10K2Q6IF99 312 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 IL34Q6ZMJ4 242 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 C6orf201Q7Z4U5 140 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-217ENST00000489581 OR9G4Q8NGQ1 327 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 SETD6Q8TBK2 473 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 RNF5Q99942 180 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 RETNQ9HD89 108 aa12.94□□□□□ -0.34
TOP3B-217ENST00000489581 IRGMA1A4Y4 181 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 SLC22A1O15245 554 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 CPEP16870 476 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 SYNJ2BPP57105 145 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 LINC00205P59089 165 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 SVOPQ8N4V2 548 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 POC5Q8NA72 575 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 ZNF485Q8NCK3 441 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 TMEM80Q96HE8 168 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 AGMATQ9BSE5 352 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-217ENST00000489581 ADAM30Q9UKF2 790 aa12.93□□□□□ -0.34
TOP3B-217ENST00000489581 PROP1O75360 226 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 IGKV1-16P04430 117 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 DEFA5Q01523 94 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 GTSCR1Q86UQ5 136 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 NKAIN3Q8N8D7 197 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 ZNF555Q8NEP9 628 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 TSNAXQ99598 290 aaKnown RBP12.92□□□□□ -0.34
TOP3B-217ENST00000489581 FAM110AQ9BQ89 295 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-217ENST00000489581 C11orf54Q9H0W9 315 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-217ENST00000489581 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
TOP3B-217ENST00000489581 A0A0G2JLM5 398 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 IZUMO1RA6ND01 250 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 SLC25A17O43808 307 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 NAPSAO96009 420 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 HTR2CP28335 458 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 CEACAM6P40199 344 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 MED21Q13503 144 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 ZNF383Q8NA42 475 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 NICN1Q9BSH3 213 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
TOP3B-217ENST00000489581 H3BUA1 57 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 CNIH1O95406 144 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 TRBV12-3P01733 135 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 CSN3P07498 182 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 CELP19835 753 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 TAS2R43P59537 309 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
TOP3B-217ENST00000489581 MOGAT2Q3SYC2 334 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 LCN12Q6JVE5 192 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 TMEM59Q9BXS4 323 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 KCNK15Q9H427 330 aa12.9□□□□□ -0.34
TOP3B-217ENST00000489581 ITGB1BP1O14713 200 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 SPDEFO95238 335 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 UBBP0CG47 229 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-217ENST00000489581 PJVKQ0ZLH3 352 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 Q8N402 240 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 IL17DQ8TAD2 202 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 EDARADDQ8WWZ3 215 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 GGHQ92820 318 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 HDHD3Q9BSH5 251 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-217ENST00000489581 HIPK2Q9H2X6 1198 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 SMPD3Q9NY59 655 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-217ENST00000489581 PEF1Q9UBV8 284 aaKnown RBP12.89□□□□□ -0.35
TOP3B-217ENST00000489581 CEPT1Q9Y6K0 416 aa12.89□□□□□ -0.35
TOP3B-217ENST00000489581 PLECQ15149 4684 aaKnown RBP12.89□□□□□ -0.35
TOP3B-217ENST00000489581 ZBTB25P24278 435 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 INSL4Q14641 139 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 TATDN3Q17R31 274 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 RPEL1Q2QD12 228 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 PQLC1Q8N2U9 271 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 TM2D1Q9BX74 207 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 FAM53CQ9NYF3 392 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 ZNF221Q9UK13 617 aa12.88□□□□□ -0.35
TOP3B-217ENST00000489581 A0A0A6YYD4 124 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 APOA2P02652 100 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 SCTP09683 121 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 MAPK3P27361 379 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-217ENST00000489581 HLA-DRB3P79483 266 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 UNC119Q13432 240 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 DYRK1AQ13627 763 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 GLT8D1Q68CQ7 371 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 ZNF343Q6P1L6 599 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 LINC00322Q6ZN03 302 aaPredicted RBP12.87□□□□□ -0.35
TOP3B-217ENST00000489581 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 BVESQ8NE79 360 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
TOP3B-217ENST00000489581 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms