RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 GPR31O00270 319 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
C9orf3-221ENST00000489562 SLC6A1P30531 599 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 BTCP35070 178 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 RUSC1-AS1Q66K80 236 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 BRD3OSQ6XYD6 125 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 OR8H3Q8N146 312 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 ZDHHC22Q8N966 263 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 BVESQ8NE79 360 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 HSD17B10Q99714 261 aaKnown RBP11.25□□□□□ -0.61
C9orf3-221ENST00000489562 ZNF251Q9BRH9 671 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 RSRP1Q9BUV0 290 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 CCL28Q9NRJ3 127 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 SDHAF2Q9NX18 166 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
C9orf3-221ENST00000489562 FAM96BQ9Y3D0 163 aa11.25□□□□□ -0.61
C9orf3-221ENST00000489562 ZNF469Q96JG9 3925 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-221ENST00000489562 NDUFB6O95139 128 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-221ENST00000489562 FBP1P09467 338 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 GNRHRP30968 328 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 ABCA11PQ4W5N1 156 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 ZNF66Q6ZN08 573 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 ZNF818PQ6ZRF7 136 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 LHFPL4Q7Z7J7 247 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 CCDC71LQ8N9Z2 235 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 ENKURQ8TC29 256 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 RTN4IP1Q8WWV3 396 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-221ENST00000489562 MRGPRFQ96AM1 343 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 BEX2Q9BXY8 128 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
C9orf3-221ENST00000489562 RNF212BA8MTL3 300 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 M0R1X1 148 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 PTTG1O95997 202 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 IGLV2-14P01704 120 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 THBS3P49746 956 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 CCR6P51684 374 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 RND3P61587 244 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 TAGLNQ01995 201 aaKnown RBP11.23□□□□□ -0.61
C9orf3-221ENST00000489562 CATR1Q13166 79 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 SSX2Q16385 188 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 RPL39P5Q59GN2 51 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 ZFAND2BQ8WV99 257 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 SLC2A9Q9NRM0 540 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 HILPDAQ9Y5L2 63 aa11.23□□□□□ -0.61
C9orf3-221ENST00000489562 IGHV1-3A0A0C4DH29 117 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 A0A0U1RQK1 487 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 A0A1W2PPI3 338 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 PROP1O75360 226 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 TCRBP04435 133 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 BRS3P32247 399 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 TAS2R31P59538 309 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 BAMBIQ13145 260 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 AANATQ16613 207 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 C11orf88Q6PI97 169 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 TCTEX1D1Q8N7M0 179 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 DUSP18Q8NEJ0 188 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 GSX1Q9H4S2 264 aaPredicted RBP11.22□□□□□ -0.61
C9orf3-221ENST00000489562 NUBP2Q9Y5Y2 271 aa11.22□□□□□ -0.61
C9orf3-221ENST00000489562 VGLL3A8MV65 326 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 B3GALNT1O75752 331 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 APOA2P02652 100 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 RRASP10301 218 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 SRD5A1P18405 259 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 MC5RP33032 325 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 DUTP33316 252 aaKnown RBP11.21□□□□□ -0.61
C9orf3-221ENST00000489562 KIR2DS2P43631 304 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 REG1BP48304 166 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 DYNLT3P51808 116 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 PIGPP57054 158 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 UBE2MP61081 183 aaKnown RBP11.21□□□□□ -0.61
C9orf3-221ENST00000489562 EIF4EBP1Q13541 118 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-221ENST00000489562 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
C9orf3-221ENST00000489562 RGS21Q2M5E4 152 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 PHLDA2Q53GA4 152 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 KCTD9Q7L273 389 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 CENPSQ8N2Z9 138 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 C17orf50Q8WW18 174 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 MRPL20Q9BYC9 149 aaKnown RBP11.21□□□□□ -0.61
C9orf3-221ENST00000489562 PRDM13Q9H4Q3 707 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 C5orf66Q9H5L9 145 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 PRELID3BQ9Y3B1 194 aa11.21□□□□□ -0.61
C9orf3-221ENST00000489562 PGLYRP1O75594 196 aaPredicted RBP11.2□□□□□ -0.62
C9orf3-221ENST00000489562 RLN1P04808 185 aa11.2□□□□□ -0.62
C9orf3-221ENST00000489562 CT45A6P0DMU7 189 aa11.2□□□□□ -0.62
C9orf3-221ENST00000489562 CT45A5P0DMU8 189 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms